DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and acs-12

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_508035.1 Gene:acs-12 / 180375 WormBaseID:WBGene00009106 Length:550 Species:Caenorhabditis elegans


Alignment Length:519 Identity:124/519 - (23%)
Similarity:220/519 - (42%) Gaps:46/519 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNT 91
            ||.:..:.:|||..:..:..|.|........|..:::..|..:|..:..|.:.:|::|.::...:
 Worm    13 PDKTFHDFLFHEWEKFREDVALIDNDTFAQFTFQDVMQKADFIAKSLVYLKVEKSEVVLLVMDWS 77

  Fly    92 THMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDG---DEFEKVRSATAELDVKI 153
            ...:.:|......|.|...::.......::...|.:....:|.|.   .|.:|:.. |...:.:|
 Worm    78 PAAIYIALGASMAGAAIQVVSPKLQAWEMQFPVKESESRFVFSDPLGLHEIDKLMK-TLNREYRI 141

  Fly   154 VTMRNHPL-DSIKIDEVVATPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITN------- 210
            :...:... :...|.|.:|...::|....|:|...| .:.:..|||..|..|.:..|:       
 Worm   142 ICTGSRDFANGYPIIEDLAFAAKQNLPLPKIEPDTD-IVYLPYSSGIHGKRKGIVTTHKVMVAKT 205

  Fly   211 ------SRH--ILAGNYHLTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDPAFALRI 267
                  |:|  ...|:..||...: :....||   .:|..:.:|:    .::.:..|.....:..
 Worm   206 MVMWNTSKHHEFRRGDTTLTMIPL-HKQCGLD---AILCALLNGL----TVVTEKNFCVHTFMTC 262

  Fly   268 IEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRL-SHDCLQFVY 331
            |:.||:......|..|.||:...:..|.::.||...:.|......|:.:...... |...:...|
 Worm   263 IQRYKIRAVHLTPYLMNLMMFEAENHTYNIESLEWVVTGADAVTEELYEEFTEIFPSVKTVTQTY 327

  Fly   332 GFTELGAMA-TINCHFDEKTGSVGQLVNGLKMKIIND-DGESLGPDEIGEVCIMNNQHWSGYYGN 394
            |.||:|.:. |.|.::   :.|.|||...|:||:::. .|:.|||.|.|::|:......|.|..|
 Worm   328 GMTEVGLICRTYNKNY---SPSCGQLTANLEMKVLDILTGKELGPREKGQICVKGIAAESPYLNN 389

  Fly   395 EVET-RNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVC 458
            ...| .:..|  ||..:||:|:.|.:|.::::|:.|||:|.......|.:||:::.....|.|..
 Worm   390 PKATEEHFLD--GWRRTGDIGFFDEEGNVHLVDKLKEMIKVFGYQVIPKEIETLLLTHQAVEEAA 452

  Fly   459 VFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQL---NGGAVIVDDLQRSANG 519
            |..|.:.:.|:...|.||.|.|......|:.|||..|. .:||.|   |    |...|.:||.|
 Worm   453 VVAINNELSGERPVAFVVLKKGFVATEDDLKDYVNKRV-IRYKHLVRVN----ITQFLPKSACG 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 124/519 (24%)
AFD_class_I 47..522 CDD:302604 119/499 (24%)
acs-12NP_508035.1 PLN02246 2..518 CDD:215137 124/519 (24%)
Firefly_Luc_like 33..514 CDD:213279 119/499 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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