DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and acs-10

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_506502.1 Gene:acs-10 / 179913 WormBaseID:WBGene00007082 Length:566 Species:Caenorhabditis elegans


Alignment Length:495 Identity:128/495 - (25%)
Similarity:212/495 - (42%) Gaps:61/495 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIF 133
            ||:.:..||....|:......|....|....|....|.|..:.:..:....::..:|.:..||:|
 Worm    60 LATALVKLGFKPGDVAAQAFPNCPEFLIAMLAVMKCGGAMSNASAIFTDYELQLQFKDSNTSIVF 124

  Fly   134 CDGDEFEKVRSATAELD--VKIVTMRNHPL------DSIKIDEVVATPIEENFQPAKLEKGNDQT 190
            .|.|...:||.:.|:..  .||:.:|..||      :.:...|:..||    .||..:....|..
 Worm   125 TDEDRLARVRRSVAKCPGVRKIICLRTFPLRAEFPENVLDFVELTQTP----DQPINVVVSPDAI 185

  Fly   191 LAILCSSGTTGTPKAVTITNSRHILA----GNYHLTT--ADVQYSHNTLDW-------------I 236
            ..:..||||||.||...:|: ::|.|    ...||.|  |...:......|             .
 Worm   186 ALLPYSSGTTGRPKGCQLTH-KNISAMLDIAQSHLETEVAQAMFGKEKPTWNKEHVLLLLPWYHA 249

  Fly   237 TGLLTTITSGVFSTTRIIADNAFDPAFALRIIEEYKV--TWTIQPPSSMAL----MINCPDFETC 295
            .||.|.:.:.:...|.::. ..||....|..|:.|||  .|.: ||..:.|    |:  |.|...
 Worm   250 YGLNTMLETILLGATGLVF-KKFDTIVMLNRIKFYKVKLAWLV-PPMLIFLAKDPMV--PIFNVA 310

  Fly   296 DMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATI------NCHFDEKTGSVG 354
            ..  |:..|..|:.|..::.:.::.|..:..|...||.||:....|:      ||.  |..||:|
 Worm   311 PY--LKVIMSAGATAGKQLCEEVQKRFPNAWLCQAYGMTEMVQFTTLPIFEHGNCF--ETVGSLG 371

  Fly   355 QLVNGLKMKIINDDGESLG-PDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDR 418
            ..   .:|||::.:|:.:. .|.:|::|........||.  :.|..::.|..|:..:||||.:|:
 Worm   372 PT---YEMKILDKEGKEVDKTDTVGQLCFRGPTIMKGYL--KKEESDIIDKDGFLKTGDLGSVDQ 431

  Fly   419 DGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSEL 483
            .|.:::..|.||::|...:...|.:||.|:...|:|.:..|.||.....|:...|.:|||..:..
 Worm   432 KGRVHVTGRIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAVIGIPDEQKGESPRAYIVKKDHTLT 496

  Fly   484 EAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
            || ::.|:|.... |.||.:: ....:|.:.:..:||..|
 Worm   497 EA-ELSDFVHKML-SSYKWID-TYEFIDAIPKLPSGKIQR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 127/493 (26%)
AFD_class_I 47..522 CDD:302604 127/492 (26%)
acs-10NP_506502.1 CaiC 17..544 CDD:223395 128/495 (26%)
Firefly_Luc_like 37..532 CDD:213279 127/492 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160518
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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