DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and ACSM1

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001305819.1 Gene:ACSM1 / 116285 HGNCID:18049 Length:577 Species:Homo sapiens


Alignment Length:505 Identity:117/505 - (23%)
Similarity:200/505 - (39%) Gaps:70/505 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LTRGELLANAMRLAS-YMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYD-RDT 119
            |||        |:|: :.::.||.|.|.:.::.........||..|...||.|....|... :|.
Human    94 LTR--------RVANVFTQTCGLQQGDHLALMLPRVPEWWLVAVGCMRTGIIFIPATILLKAKDI 150

  Fly   120 IEKIYKVTRPSIIFCD--GDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVV--ATPIEENFQP 180
            :.::.......|:..|  ..|.:.:.|....|..|::...:.....:....:|  |:|.....:.
Human   151 LYRLQLSKAKGIVTIDALASEVDSIASQCPSLKTKLLVSDHSREGWLDFRSLVKSASPEHTCVKS 215

  Fly   181 AKLEKGNDQTLAILCSSGTTGTPKAV----------TITNSRHILAGNYHLTTADVQYSHNTLDW 235
            ..|:     .:.|..:|||||.||..          :...||.:.:    |.|:||.:..:...|
Human   216 KTLD-----PMVIFFTSGTTGFPKMAKHSHGLALQPSFPGSRKLRS----LKTSDVSWCLSDSGW 271

  Fly   236 ITGLLTTI----TSGVFSTTRIIADNAFDPAFALRIIEEYKVT--WTIQPPSSMALMINCPDFET 294
            |...:.|:    |:|  .|..|.....||....::.:.:|.:.  |.:   ||:..||...||.:
Human   272 IVATIWTLVEPWTAG--CTVFIHHLPQFDTKVIIQTLLKYPINHFWGV---SSIYRMILQQDFTS 331

  Fly   295 CDMSSL-RCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFDEKTGSVGQLVN 358
            ....:| .||.  |....|...:....|.:...|...||.:|.|.:.........|.|.:|:...
Human   332 IRFPALEHCYT--GGEVVLPKDQEEWKRRTGLLLYENYGQSETGLICATYWGMKIKPGFMGKATP 394

  Fly   359 GLKMKIINDDGESLGPDEIGEVCIMNN-----QHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDR 418
            ...:::|:|.|..|.|:..|.:.|...     ..:..|.|:..:|..: :...:|::||.|.||.
Human   395 PYDVQVIDDKGSILPPNTEGNIGIRIKPVRPVSLFMCYEGDPEKTAKV-ECGDFYNTGDRGKMDE 458

  Fly   419 DGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV------- 476
            :|::..:.|..:::........|.::||.:.|.|.|||..|.|....|.|:...|.:|       
Human   459 EGYICFLGRSDDIINASGYRIGPAEVESALVEHPAVAESAVVGSPDPIRGEVVKAFIVLTPQFLS 523

  Fly   477 ---KKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
               .:|..||:     .:|:|.| :.||... ....|.:|.::..||..|
Human   524 HDKDQLTKELQ-----QHVKSVT-APYKYPR-KVEFVSELPKTITGKIER 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 116/503 (23%)
AFD_class_I 47..522 CDD:302604 116/502 (23%)
ACSM1NP_001305819.1 MACS_euk 45..574 CDD:341251 117/505 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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