DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsm3

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_002932029.3 Gene:acsm3 / 100491087 XenbaseID:XB-GENE-486978 Length:581 Species:Xenopus tropicalis


Alignment Length:383 Identity:87/383 - (22%)
Similarity:160/383 - (41%) Gaps:57/383 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 KGNDQTLAILCSSGTTGTPKAVTITNSRHI-------LAGNY--HLTTADVQYSHNTLDWITGLL 240
            |.:| .:.|..:|||||:||   :|...|.       :.|.|  .||..|:.::.:...|.....
 Frog   220 KSSD-PMTIFFTSGTTGSPK---MTEHSHCSYGLGLKVNGKYWMDLTPTDIVWNMSDTGWAKSAW 280

  Fly   241 TTITSGVFSTTRIIADN--AFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCY 303
            :::.:.....:.:.|.:  .||....|:.:..:.:|.....|::..::: ..:|.:....||:..
 Frog   281 SSVFAPWIQGSCVFAHSMPRFDTNIVLKTLSTFPITTFCSAPTAYRMLV-LQNFASYKFKSLQHC 344

  Fly   304 MFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFDEKTGSVGQLVNGLKMKIINDD 368
            :..|.....:|.:..:.:...|..: .||.||...:.........|.||:|:......::|::::
 Frog   345 VSAGEPINPQVMEQWKEQTGLDIYE-GYGQTETVLICGTFKGMKIKPGSMGKPSPAYDVEIVDEN 408

  Fly   369 GESLGPDEIGEV----------CIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLY 423
            |..|...:.|::          |:     :|.|.|:...|.:.|.. .:|.:||.|..|.||:.:
 Frog   409 GNVLPQGKEGDIAIRILPQKPFCL-----FSQYTGDPERTASTRRG-NFYLTGDRGIKDEDGYFW 467

  Fly   424 IMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV----------KK 478
            .:.|..:::........|.::||.:.|.|.|||..|......|.|:...|.||          :|
 Frog   468 FVGRSDDVILSSGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFVVLAPAYNGYDPEK 532

  Fly   479 LGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNRMANKAYFLHLKNR 536
            |..||:     ::||:.| :.||... ....|..|.::.:||..|.       .|:||
 Frog   533 LALELQ-----EHVRNIT-APYKYPR-KIEFVQQLPKTVSGKIRRN-------ELRNR 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 83/368 (23%)
AFD_class_I 47..522 CDD:302604 83/367 (23%)
acsm3XP_002932029.3 MACS_euk 49..578 CDD:341251 87/383 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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