DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsm3

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:500 Identity:111/500 - (22%)
Similarity:201/500 - (40%) Gaps:58/500 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ELLANAMRLASYMRSL-GLLQSDIVGIIGRNTTHMLAVAYACFFNG-IAFHSLNITYDRDTIEKI 123
            ||..::.:||:.:|.: .|.:.|.|.:|.........|..||...| :.....:....||...::
Zfish   102 ELGFHSRKLANVLRQVCSLERGDRVFLILPRVPEWWLVNVACIRTGTVLIPGTSQLTARDMRHRL 166

  Fly   124 YKVTRPSIIFCDGDEFEKVRSATAELDVKIVT----MRNHPLDSI-KIDEVVATPIEENFQPAKL 183
            .......:|   .||.......|..||...::    :.:.|:|.. .:.|::....:::   ..:
Zfish   167 ITSGAKCVI---TDETLAPLLDTVALDCPSISTKLLLSHKPMDGWGNLTELMGRVSDDH---VCV 225

  Fly   184 EKGNDQTLAILCSSGTTGTPKAVTITNSRH-------ILAGNYHLTTADVQYSHNTLDWITGLLT 241
            :..:::.:.|..:|||||:||   :|...|       .:.|.|.|...:.....||.|  ||...
Zfish   226 DTSSEEPMTIFFTSGTTGSPK---MTQHSHCSYGLGLTVNGRYWLDLTEQDVFWNTSD--TGWAK 285

  Fly   242 TITSGVFST----TRIIADN--AFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSL 300
            :..|.||:.    ..:...:  .||....|:.:..|.:|.....|::..:::. .|.......:|
Zfish   286 SAWSSVFAPWIQGACVFVHHMPRFDTNTVLKTLSHYPITTFCTAPTAYRMLVQ-DDLSKYKFQAL 349

  Fly   301 RCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFDEKTGSVGQLVNGLKMKII 365
            ...:..|.....||....:.....|..: .||.||...:|........|.||.|:...|..::::
Zfish   350 EHCLCAGEPINPEVMCKWKELTGLDIYE-GYGQTETVLIAGTFKGMKIKPGSFGKASPGYDVQVV 413

  Fly   366 NDDGESLGPDEIGEVCIMNNQH-----WSGYYGNEVETRN-MRDSLGWYHSGDLGYMDRDGFLYI 424
            :::|..:...:.|::.|.....     ::.|.|..|.|.. .|..  :|.:||.|.||.:|:|:.
Zfish   414 DENGSVVPKGQEGDLGIRVKPERPFSLFTEYTGEPVRTAECFRGD--FYLTGDRGMMDDEGYLWF 476

  Fly   425 MDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV----------KKL 479
            :.|..:::........|.::|:.:.|.|.|||..|......:.|:...|.||          |:|
Zfish   477 IGRSDDVILSAGYRIGPFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVVLTADFKSRAHKEL 541

  Fly   480 GSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNRM 524
            ..||:.     :|:|.| :.||... ....||.|.::.:||..|:
Zfish   542 IKELQT-----HVKSIT-APYKYPR-KIEFVDQLPKTVSGKIRRV 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 110/497 (22%)
AFD_class_I 47..522 CDD:302604 110/496 (22%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 111/499 (22%)
AFD_class_I 57..586 CDD:302604 111/499 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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