DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and GLRA3

DIOPT Version :10

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_006520.2 Gene:GLRA3 / 8001 HGNCID:4328 Length:464 Species:Homo sapiens


Alignment Length:473 Identity:198/473 - (41%)
Similarity:275/473 - (58%) Gaps:39/473 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SGHYFWAILYFASLCSASLANNAKINFRE-KEKKVLDQILG-AGKYDARIRPSGINGTDGPAV-V 64
            ||.|||......||.:....::|:..... .....||:::| ...|||||||:    ..||.| |
Human    12 SGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDARIRPN----FKGPPVNV 72

  Fly    65 RVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEK 129
            ..|||:.|...|.:.||:|.|.:..|::|.|.||.:.:.......|..:..:.:|.|||||:|||
Human    73 TCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEK 137

  Fly   130 EGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFL 194
            ..:||.:...|..:|||.||:||||||::|||:|||:||.:|:|.|.|.:::.|:|:|.|||:|.
Human   138 GANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 202

  Fly   195 WKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 257
            |::..||||.:.|.||:|.|  ||.|. ||....|||:::|::|....:|:..|||||:|||..:
Human   203 WQDEAPVQVAEGLTLPQFLLKEEKDLR-YCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLL 266

  Fly   258 LVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGAL 322
            :||:||||||::..|.||||:||:||:|||.||:||..||||.|||.||||:|..|||.|||.||
Human   267 IVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 331

  Fly   323 LEFALVNYASRSGSNKANMHKE--NMKKKRRDLEQA-SLDAASDLLDTDSNATFAMASQFARGGG 384
            ||:|.||:.||       .|||  ..::||::..:| :|:......|.|.....:..|..|.|.|
Human   332 LEYAAVNFVSR-------QHKELLRFRRKRKNKTEAFALEKFYRFSDMDDEVRESRFSFTAYGMG 389

  Fly   385 ---QQKP--LVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVF 444
               |.|.  ..:.|..|:.:           .||.|:..:   ..|..|:|:||.|||..|||.|
Human   390 PCLQAKDGMTPKGPNHPVQV-----------MPKSPDEMR---KVFIDRAKKIDTISRACFPLAF 440

  Fly   445 ALFNLVYWSTYLFREEED 462
            .:||:.||..|.....||
Human   441 LIFNIFYWVIYKILRHED 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 195/464 (42%)
GLRA3NP_006520.2 LIC 12..451 CDD:273305 195/464 (42%)

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