Sequence 1: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001072255.1 | Gene: | glrb / 779708 | XenbaseID: | XB-GENE-1011734 | Length: | 497 | Species: | Xenopus tropicalis |
Alignment Length: | 482 | Identity: | 164/482 - (34%) |
---|---|---|---|
Similarity: | 265/482 - (54%) | Gaps: | 63/482 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LCSASLA--NNAKINFREKEKKVLDQILGAGKYDARIRPS--GINGTDGPAVVRVNIFVRSISKI 76
Fly 77 DDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTL--TEANRVWMPDLFFSNEKEGHFHNIIM 138
Fly 139 PNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQV 203
Fly 204 VKNLHLPRFTLEKFLTDYCNSK---TNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVS 265
Fly 266 FWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFA---- 326
Fly 327 LVNYASRSGSNKANMHK--------ENMKKKR------RDLEQASLD-----------AASDLLD 366
Fly 367 TDSNATFAMASQFARGGGQQKPLVRHP--GDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRS 429
Fly 430 KRIDVISRITFPLVFALFNLVYWSTYL 456 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 162/479 (34%) |
glrb | NP_001072255.1 | LIC | 38..496 | CDD:273305 | 162/479 (34%) |
LGIC_ECD_GlyR_beta | 79..265 | CDD:349811 | 77/187 (41%) | ||
Cys-loop | 183..197 | CDD:349811 | 7/13 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 174 | 1.000 | Domainoid score | I3617 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 332 | 1.000 | Inparanoid score | I2384 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D276914at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm49352 | |
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.070 |