Protein Alignment GluClalpha and gabra1

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: XP_009293960.1
• Gene: gabra1 / 768183
• ZFINID: ZDB-GENE-061013-194
• Length: 470
• Species: Danio rerio
• Alignment Length: 475
• Identity: 171/475 - (36%)
• Similarity: 252/475 - (53%)
• Gaps: 65/475 - (13%)

  Fly     6 YFWAILYFASLCSASLANNAKINFREKEK-------KVLDQILGAGKYDARIRPS-GINGTDGPA 62
            :.||.|    |.:.:||..:.....:::|       ::||.:|..  ||.|:||. |...|:
Zfish    23 WIWACL----LVTNALAGKSSSQNADEQKDNTTVFTRILDSLLDG--YDNRLRPGLGERVTE--- 78

  Fly    63 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFF 125
             |:.:|||.||..:.|..|||::.:.||:.|.||||||   :|.:..|.|..  |:::|.||.||
Zfish    79 -VKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKF---KGPMAVLRLNNLMASKIWTPDTFF 139

  Fly   126 SNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTND 190
            .|.|:...||:.|||..:||...|::||::|:::...|||:|:.:|:|...|.|:..||.:|..:
Zfish   140 HNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAE 204

  Fly   191 LVFLWKEGDPVQVV---KNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIY 252
            :|::|..|....||   ....|.::.|.....|....:::||||..:......||:..|::||.|
Zfish   205 VVYVWTRGAAQSVVVADDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTY 269

  Fly   253 IPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTF 317
            :||.|.||:|.|||||::.:||||...||||:|||.|.:.....|||.|:|..|:|.:..||..|
Zfish   270 LPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 334

  Fly   318 VFGALLEFALVNYASRSG---SNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQF 379
            ||.||:|||.|||.::.|   ..|:.:.::..|||            ..||..::..|.|.|:.|
Zfish   335 VFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK------------ESLLKKNNTYTAATATAF 387

  Fly   380 ARGGGQQKPLVRHPG--------DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVIS 436
            |..      :.|.||        .|...|.:.:     ..||.|...||:.|     ..:||.|:
Zfish   388 APN------IARDPGLATIAKSAPPPPTEPKEE-----PKPKPPEAKKTFNS-----VSKIDRIA 436

  Fly   437 RITFPLVFALFNLVYWSTYL 456
            ||.|||:|..||||||:|||
Zfish   437 RIAFPLLFGTFNLVYWATYL 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	168/472 (36%)
gabra1	XP_009293960.1	LIC	17..455	CDD:273305	168/472 (36%)
		Neur_chan_LBD	54..261	CDD:280998	76/215 (35%)
		Neur_chan_memb	268..452	CDD:280999	80/211 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910