Protein Alignment GluClalpha and gabrb4

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: XP_005173931.1
• Gene: gabrb4 / 566514
• ZFINID: ZDB-GENE-070424-211
• Length: 512
• Species: Danio rerio
• Alignment Length: 517
• Identity: 172/517 - (33%)
• Similarity: 255/517 - (49%)
• Gaps: 91/517 - (17%)

  Fly     9 AILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSI 73
            |.|.|.....:|...:..|:.   .|..:|::|..  ||.|:||. ..|.  |.:|.::|.:.||
Zfish    17 AALSFVCFAQSSSTGSTGISV---AKTTVDKLLKG--YDIRLRPD-FGGP--PVIVGMSINIASI 73

  Fly    74 SKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRV----WMPDLFFSNEKEGHFH 134
            ..|.:|.|:|::.:.|::.|.|:||.:.::.     |.||..|||    |:||.:|.|:|:...|
Zfish    74 DSISEVNMDYTITMYFQQSWRDKRLAYAEMA-----LNLTLDNRVADQLWLPDTYFLNDKKSFLH 133

  Fly   135 NIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGD 199
            .:.:.|..||:.|:|:|||.:||:.|.||.|:|:.||||.|.|:|.:.|||:||:|:||.|:.||
Zfish   134 GVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD 198

  Fly   200 -PVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSW 263
             .|..|..|.||:|::.:........:..||.|..|.:....||...|:::|.|:|..::.|:||
Zfish   199 NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSW 263

  Fly   264 VSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALV 328
            ||||::..|..|||:|||||:|||.|..:.:..:||.:.|.|||||:...|..|||.||||:|.|
Zfish   264 VSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFV 328

  Fly   329 NYA-----------SRSGSNKANMHKENMKKK----------------------RRDL-----EQ 355
            ||.           .....||||..:...::|                      ||:|     .:
Zfish   329 NYVFFGRGPQQQKKINERLNKANNERPRYEEKRLREQDSISAPFQSNTLRSYTQRRNLYLEEQRK 393

  Fly   356 ASLDAASDLLDT------------------DS-NATFAMAS---QFARGGGQQKPLVRHPGDPLA 398
            ..:||..::|.|                  || |:..:..|   ||.:..|.:.....|..|..|
Zfish   394 VGVDAYGNILLTTLEMNNEVMPSDVGSSVSDSRNSVMSFDSSGVQFRKPMGSRDGFSHHSLDRSA 458

  Fly   399 LEKRLQCEVHMQAPKR----PNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYL 456
            :..|..|.:..::.|.    ||.         |....||..|||.||:.|..|||:||..|:
Zfish   459 MRSRANCRLRRRSSKLKLKIPNL---------TDVSTIDKWSRIIFPITFGFFNLIYWLYYV 511

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	171/514 (33%)
gabrb4	XP_005173931.1	LIC	13..510	CDD:273305	171/514 (33%)
		Neur_chan_LBD	42..244	CDD:280998	80/211 (38%)
		Neur_chan_memb	251..507	CDD:280999	81/264 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910