Protein Alignment GluClalpha and gabra6a

DIOPT Version :10

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: XP_005173169.1
• Gene: gabra6a / 393704
• ZFINID: ZDB-GENE-040426-1692
• Length: 435
• Species: Danio rerio
• Alignment Length: 465
• Identity: 162/465 - (34%)
• Similarity: 248/465 - (53%)
• Gaps: 57/465 - (12%)

  Fly    11 LYFASLCSASLAN---NAKINFREKEKKVLDQILGAGKYDARIRP-SGINGTDGPAVVRVNIFVR 71
            |..|.||..|:.|   ..||| .|...::||.:|..  ||.|:|| ||::.|:    |:.:|||.
Zfish     3 LLLAFLCLTSVTNVIGKQKIN-SENITRILDGLLEG--YDNRLRPGSGVSVTE----VKTDIFVT 60

  Fly    72 SISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFH 134
            |...:.||.||:::.:.||:.|.||||.|   ||.::.|.|..  .:::|.||.||.|.::...|
Zfish    61 SFGPVSDVNMEFTMDMFFRQMWVDERLAF---QGPIEILPLNNRMVDKIWTPDTFFRNARKSLAH 122

  Fly   135 NIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGD 199
            |:..||...||..||:|.|::|::::..|||.|:.:|:|...|.|...||.:|..::|:.|::|.
Zfish   123 NMTSPNKLFRIMQNGTVFYTMRLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGL 187

  Fly   200 PVQV---VKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLV 259
            ...|   .::..|.::.|  :...|:  ..|.:||.||...|....:|:..|:|||.|||..|:|
Zfish   188 EASVDFPPESSSLLQYDLLGQTLFTE--TYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVV 250

  Fly   260 IVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLE 324
            ::|.||||:::.:||||...|:||:|||.|.:....:|||.|||..|:|.:..||..||..||:|
Zfish   251 VLSQVSFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALVE 315

  Fly   325 FALVNYASRSGSNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPL 389
            ||.|||.:...:|     :||.|..|..:.::....:.|..::..:.|    |.::|
Zfish   316 FAAVNYYATLEAN-----RENHKLPRGSIVESQAQGSDDEPESPQSDT----SAYSR-------- 363

  Fly   390 VRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTR-----SKRIDVISRITFPLVFALFNL 449
             :..|.|::...|.:..:.:|.           |.||..     :..||..|||.|||.|.:|||
Zfish   364 -KRRGYPVSEAPRTRVPIFLQG-----------SAFPPNMMLAGTSAIDKYSRILFPLAFGIFNL 416

  Fly   450 VYWSTYLFRE 459
            |||..||.::
Zfish   417 VYWYIYLSKD 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	160/459 (35%)
gabra6a	XP_005173169.1	LIC	2..422	CDD:455710	160/459 (35%)
		LGIC_ECD	37..234	CDD:475126	70/207 (34%)