DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and CG12344

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster


Alignment Length:468 Identity:131/468 - (27%)
Similarity:210/468 - (44%) Gaps:72/468 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYS 84
            |.|..|.:|:..|.:.||..     .|...|||....|:  |.:|..:|||..|:.|:...|::.
  Fly    23 SEATEAHMNYTAKPRVVLPP-----NYVKEIRPPSKKGS--PVIVDFSIFVVDINSINVEDMDFR 80

  Fly    85 VQLTFREQWTDERLKF-DDI--QGRLKYLTLTEA--NRVWMPDLFFSNEKEGHFHNIIMPNVYIR 144
            |.:...::|.:.||:. |||  :|. .|:||...  ...|.||.:|.|.|......:......:.
  Fly    81 VDMFIHQRWLESRLEIPDDIFEEGD-DYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVT 144

  Fly   145 IFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHL 209
            ::.|.:|.|:.|:...:||.|..:|||:|.|:|.:.:.|:......:...|.:.. |.:...|.|
  Fly   145 LYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSG-VTLNPELKL 208

  Fly   210 PRFTLEKFL-----TDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLD 269
            .::.|.:.|     ..|...|  .|.:|.|.|...|:|:..::|||.:.|..::|::||.||||.
  Fly   209 LQYNLGQPLELEESDGYMPEK--VGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLG 271

  Fly   270 QGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRS 334
            ..|:|.||:|.||.:||:.|..:|  |.:|||:|.||:|:|...|:..||.||.||.:|......
  Fly   272 LDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQ 334

  Fly   335 GSNKAN-------MHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRH 392
            ...:.|       |...||:|                      ...|..:.:..|..:.:...:.
  Fly   335 YQYQVNRIPKVLPMRISNMEK----------------------GQCATVASWEGGAVRSRKATQT 377

  Fly   393 PGDPLALEKRLQCEVHMQ---APKRPNCCKTWLSKFPTRS---------KRIDVISRITFPLVFA 445
            |..|        .:..:|   .|.:|...::.||...|.:         :.||.:||..||::|.
  Fly   378 PTTP--------GQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFF 434

  Fly   446 LFNLVYWSTYLFR 458
            :|.|:||...|.:
  Fly   435 VFVLLYWPILLMK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 130/463 (28%)
CG12344NP_001286298.1 LIC 8..441 CDD:273305 128/460 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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