Sequence 1: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001355511.1 | Gene: | lgc-38 / 3565717 | WormBaseID: | WBGene00017389 | Length: | 479 | Species: | Caenorhabditis elegans |
Alignment Length: | 471 | Identity: | 157/471 - (33%) |
---|---|---|---|
Similarity: | 246/471 - (52%) | Gaps: | 66/471 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAV-VRVNIFVRSISKIDDVTMEY 83
Fly 84 SVQLTFREQWTDERLKFD-DIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFP 147
Fly 148 NGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRF 212
Fly 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARV 277
Fly 278 SLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMH 342
Fly 343 KENMKKKRRDLEQASLDAASDL--LDTDSNATFAMASQFARGG---------------------- 383
Fly 384 ----GQQKPLVRHPGDPLALEKRLQCEVHMQAPKRP----NCCKTWLSKFPTRSKRIDVISRITF 440
Fly 441 PLVFALFNLVYWSTYL 456 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 156/468 (33%) |
lgc-38 | NP_001355511.1 | LIC | 42..476 | CDD:273305 | 155/465 (33%) |
LGIC_ECD_GABAR_RDL-like | 76..257 | CDD:349809 | 66/181 (36%) | ||
Cys-loop | 177..191 | CDD:349809 | 9/13 (69%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45222 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4995 |
SonicParanoid | 1 | 1.000 | - | - | X271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |