DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and ZACN

DIOPT Version :10

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_851321.2 Gene:ZACN / 353174 HGNCID:29504 Length:412 Species:Homo sapiens


Alignment Length:301 Identity:63/301 - (20%)
Similarity:112/301 - (37%) Gaps:39/301 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWM 120
            |....|.:|.|.:||.::..:|.:....|..|..|..|.|.||.::........:||...: :|.
Human    54 NNGSAPLLVDVRVFVSNVFNVDILRYTMSSMLLLRLSWLDTRLAWNTSAHPRHAITLPWES-LWT 117

  Fly   121 PDLFFSNEKEGHFHNIIMPNVYI---------RIFPNGSVLYSIRISLTLACPMNLKLYPLDRQI 176
            |.|            .|:..:::         |:..:|.|..::.::....|...|..:|.|...
Human   118 PRL------------TILEALWVDWRDQSPQARVDQDGHVKLNLALATETNCNFELLHFPRDHSN 170

  Fly   177 CSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFK 241
            |||...:...|..:|.|.....:.:..||.        |..:.|............|.:|.|..|
Human   171 CSLSFYALSNTAMELEFQAHVVNEIVSVKR--------EYVVYDLKTQVPPQQLVPCFQVTLRLK 227

  Fly   242 REFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
            ......:|.:.:|...|::.......|...|: .|:...||.||:.....|.:..:||..|....
Human   228 NTALKSIIALLVPAEALLLADVCGGLLPLRAI-ERIGYKVTLLLSYLVLHSSLVQALPSSSSCNP 291

  Fly   307 IDV-WTGVCLTFVFGALLEFALV-------NYASRSGSNKA 339
            :.: :..:.|..:|.:.:|..|:       |..::||.:.|
Human   292 LLIYYFTILLLLLFLSTIETVLLAGLLARGNLGAKSGPSPA 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 63/301 (21%)
ZACNNP_851321.2 LGIC_ECD_ZAC 60..229 CDD:349795 39/189 (21%)
Cys-loop 157..171 CDD:349795 4/13 (31%)
LGIC_TM 231..407 CDD:476813 22/103 (21%)
TM1 helix 235..255 CDD:349850 3/19 (16%)
TM2 helix 263..284 CDD:349850 5/20 (25%)
TM3 helix 295..317 CDD:349850 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..360 2/5 (40%)
TM4 helix 365..386 CDD:349850
Blue background indicates that the domain is not in the aligned region.

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