Sequence 1: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
Alignment Length: | 527 | Identity: | 106/527 - (20%) |
---|---|---|---|
Similarity: | 201/527 - (38%) | Gaps: | 145/527 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 EKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDER 97
Fly 98 LKFDDIQ-GRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTL 161
Fly 162 ACPMNLKLYPLDRQICSLRMASYGWTTN--DLVFLWKEGDPVQVVKNLHLPRFTLEKFLTD---- 220
Fly 221 --YCNSKTNTGEYSCLK---VDLLF----KREFSYYLIQIYIPCCMLVIVSWVSFWL--DQGAVP 274
Fly 275 ARVSLGVTTLLTMATQTSGINASLPP---------VSYTKAIDVWTGV----------------- 313
Fly 314 ---CLTFVFGA--LLEFALVNYASRSGSNKANMHK------------------------------ 343
Fly 344 ---ENMKKKRRDLEQASLDAASDLLDTDSNATFAMA-SQFARGGGQQKPLVRHPGDPLALEKR-- 402
Fly 403 -LQC---EVHMQAPKRPNCCKTWLSKFPTRSKRID--------------VISRITFPLVFALFNL 449
Fly 450 VYWSTYL 456 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 104/524 (20%) |
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 106/527 (20%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 44/196 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447320 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |