Protein Alignment GluClalpha and Gabra5

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: NP_058991.2
• Gene: Gabra5 / 29707
• RGDID: 61859
• Length: 464
• Species: Rattus norvegicus
• Alignment Length: 449
• Identity: 160/449 - (35%)
• Similarity: 241/449 - (53%)
• Gaps: 69/449 - (15%)

  Fly    35 KVLDQILGAGKYDARIRPSGINGTDGPAV--VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDER 97
            ::||.:|..  ||.|:|| |:    |..:  ||.:|:|.|...:.|..|||::.:.||:.|.|||
  Rat    51 RILDGLLDG--YDNRLRP-GL----GERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108

  Fly    98 LKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLT 160
            |:|   :|.::.|.|..  |:::|.||.||.|.|:...||:..||..:|:..:|::||::|::::
  Rat   109 LRF---KGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTIS 170

  Fly   161 LACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVV--------KNLHLPRFTLEKF 217
            ..|||.|:.:|:|...|.|:..||.:..:::|::|..|....||        ...||...|:.
  Rat   171 AECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVG-- 233

  Fly   218 LTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVT 282
             |:  |..|:||||:.:......||:..|::||.|:||.|.||:|.|||||::.:||||...|||
  Rat   234 -TE--NISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 295

  Fly   283 TLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSG---SNKANMHKE 344
            |:|||.|.:.....|||.|:|..|:|.:..||..|||.||:|||.|||.::.|   ..|..:...
  Rat   296 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA 360

  Fly   345 NMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRL------ 403
            .:|||.|:|          :|:..:||       |..|      .:.||  |...:::|
  Rat   361 KIKKKEREL----------ILNKSTNA-------FTTG------KLTHP--PNIPKEQLPGGTGN 400

  Fly   404 ---QCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFRE 459
               ...:.....|.....||:.|     ..:||.:|||.||::|..||||||:|||.||
  Rat   401 AVGTASIRASEEKTSESKKTYNS-----ISKIDKMSRIVFPILFGTFNLVYWATYLNRE 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	155/443 (35%)
Gabra5	NP_058991.2	LIC	15..450	CDD:273305	155/443 (35%)
		LGIC_ECD_GABAAR_A5	58..256	CDD:349839	70/212 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	382..414		4/33 (12%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910