Protein Alignment GluClalpha and Gabrr2

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: XP_038965308.1
• Gene: Gabrr2 / 29695
• RGDID: 61902
• Length: 491
• Species: Rattus norvegicus
• Alignment Length: 449
• Identity: 149/449 - (33%)
• Similarity: 238/449 - (53%)
• Gaps: 53/449 - (11%)

  Fly    34 KKVLD----------QILGAGKYDARIRPSGINGTDGPAV-VRVNIFVRSISKIDDVTMEYSVQL 87
            ||.||          .:|....:|..:||:    ..|||: |.|::.|.|:..|.:|.|::::.|
  Rat    68 KKNLDVTKIRTGKPRPLLRVEDHDFTMRPA----FGGPAIPVGVDVQVESLDSISEVDMDFTMTL 128

  Fly    88 TFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVL 152
            ..|..|.||||.|.....|..........::|:||:||.:.|....|:....|:.:|:||:|.||
  Rat   129 YLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVL 193

  Fly   153 YSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGD-PVQVVKNLHLPRFTLEK 216
            ||:||::|..|.|:...:|||.|.|||.:.||.:|..||:..||.|| .::..:.:.|.:|.::|
  Rat   194 YSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQK 258

  Fly   217 FLTDYCNSK----TNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARV 277
            |.|   .|:    ::||.|:.|.::...:|...::|:|.|.|..::|::||||||:|..||||||
  Rat   259 FHT---TSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARV 320

  Fly   278 SLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMH 342
            |||:.|:|||:|..:|:|||:|.|||.:|:|::..|...|||.::||:|.|||.:..
  Rat   321 SLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTV-------- 377

  Fly   343 KENMKKKRRD----------LEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPL 397
            :|..::|.||          ....:||.:....:.:|.|.:..:........|.|.:|.     |
  Rat   378 QEQKERKLRDKFPCTCGMLHSRTMTLDGSYSESEANSLAGYPRSHILPEEERQDKIVVH-----L 437

  Fly   398 ALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKR-IDVISRITFPLVFALFNLVYWSTY 455
            ||...|      .:.::....|..:..:..::.. ||..||:.||..:.:|||:|||.:
  Rat   438 ALNSEL------TSSRKKGLLKGQMGLYIFQNTHAIDKYSRLIFPAFYIVFNLIYWSVF 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	149/447 (33%)
Gabrr2	XP_038965308.1	LIC	87..490	CDD:273305	144/428 (34%)
		LGIC_ECD_GABAAR_rho	102..287	CDD:349806	65/187 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910