DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and GLRA1

DIOPT Version :10

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_047273061.1 Gene:GLRA1 / 2741 HGNCID:4326 Length:465 Species:Homo sapiens


Alignment Length:467 Identity:194/467 - (41%)
Similarity:264/467 - (56%) Gaps:43/467 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FWAILYFASLCSASLANNAKINFREKEKKV-----LDQILG-AGKYDARIRPSGINGTDGPAV-V 64
            |.:.|:..||.::..|..|    |...|.:     ||:::| ...|||||||:    ..||.| |
Human    27 FCSPLFLLSLAASKEAEAA----RSAPKPMSPSDFLDKLMGRTSGYDARIRPN----FKGPPVNV 83

  Fly    65 RVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEK 129
            ..|||:.|...|.:.||:|.|.:..|:||.|.||.:::.......|..:..:.:|.|||||:|||
Human    84 SCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEK 148

  Fly   130 EGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFL 194
            ..|||.|...|..:||..||:|||||||:|||||||:||.:|:|.|.|.:::.|:|:|.|||:|.
Human   149 GAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 213

  Fly   195 WKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 257
            |:|...|||...|.||:|.|  ||.|. ||....|||:::|::.....:|:..|||||:|||..:
Human   214 WQEQGAVQVADGLTLPQFILKEEKDLR-YCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLL 277

  Fly   258 LVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGAL 322
            :||:||:|||::..|.||||.||:||:|||.||:||..||||.|||.||||:|..|||.|||.||
Human   278 IVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 342

  Fly   323 LEFALVNYASRSGSNKANMHKE--NMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQ 385
            ||:|.||:.||       .|||  ..::|||..::          |......|..:   |.|.| 
Human   343 LEYAAVNFVSR-------QHKELLRFRRKRRHHKE----------DEAGEGRFNFS---AYGMG- 386

  Fly   386 QKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLV 450
              |......|.::::...........|......:.....|..|:|:||.||||.||:.|.:||:.
Human   387 --PACLQAKDGISVKGANNSNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMF 449

  Fly   451 YWSTYLFREEED 462
            ||..|.....||
Human   450 YWIIYKIVRRED 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 191/458 (42%)
GLRA1XP_047273061.1 LIC 24..454 CDD:273305 191/458 (42%)

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