DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and GABRP

DIOPT Version :10

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_055026.1 Gene:GABRP / 2568 HGNCID:4089 Length:440 Species:Homo sapiens


Alignment Length:468 Identity:151/468 - (32%)
Similarity:248/468 - (52%) Gaps:63/468 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISK 75
            |:...:|......|.::...:|......:.|.|| |:..:||   |....|..:.:.:.:.|||.
Human    14 LFTERMCIQGSQFNVEVGRSDKLSLPGFENLTAG-YNKFLRP---NFGGEPVQIALTLDIASISS 74

  Fly    76 IDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRV---WMPDLFFSNEKEGHFHNII 137
            |.:..|:|:..:..|::|.|:||.|   :|. |..|| :|..|   |:||.:....|:...|.:.
Human    75 ISESNMDYTATIYLRQRWMDQRLVF---EGN-KSFTL-DARLVEFLWVPDTYIVESKKSFLHEVT 134

  Fly   138 MPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG-DPV 201
            :.|..||:|.||:|||::||:.|:||.|:|..||:|.|.|.|::.|:|:..||:.|.|..| |.|
Human   135 VGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSV 199

  Fly   202 QVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSF 266
            :.:::|.|.::|:|::.|....|:..||.|:.|.:....:|...|::::.|:|...||::|||||
Human   200 RGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSF 264

  Fly   267 WLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVS-YTKAIDVWTGVCLTFVFGALLEFALVNY 330
            |:...:||||..:||||:|:|.|...|...|||..: :.|||||:.|:|.:||||||||:|:.:|
Human   265 WISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHY 329

  Fly   331 ASRS-------GSNK-------ANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFAR 381
            :|..       |:.|       .|:...::...:|.:..||::.:||.:|. |:.|...:.:|  
Human   330 SSLQQMAAKDRGTTKEVEEVSITNIINSSISSFKRKISFASIEISSDNVDY-SDLTMKTSDKF-- 391

  Fly   382 GGGQQKPLVRHPGDPLALEK--RLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVF 444
                 |.:.|        ||  |:.....:|.|                 ..:|..|::.|||:|
Human   392 -----KFVFR--------EKMGRIVDYFTIQNP-----------------SNVDHYSKLLFPLIF 426

  Fly   445 ALFNLVYWSTYLF 457
            .|.|:.||:.|::
Human   427 MLANVFYWAYYMY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 150/464 (32%)
GABRPNP_055026.1 LIC 43..437 CDD:455710 146/435 (34%)
LGIC_ECD 60..241 CDD:475126 65/185 (35%)

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