Sequence 1: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445748.1 | Gene: | Glrb / 25456 | RGDID: | 2706 | Length: | 496 | Species: | Rattus norvegicus |
Alignment Length: | 462 | Identity: | 163/462 - (35%) |
---|---|---|---|
Similarity: | 255/462 - (55%) | Gaps: | 65/462 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 VLDQILGAGKYDARIRPS--GINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERL 98
Fly 99 KF-DDIQGRLKYLTL--TEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLT 160
Fly 161 LACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSK 225
Fly 226 ---TNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTM 287
Fly 288 ATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALV----NYASRSGSNKANMHKE---- 344
Fly 345 ----NMKKKR------RDLEQASLD-----------AASDLLDTDSNATFAMASQFARGG----G 384
Fly 385 QQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNL 449
Fly 450 VYWSTYL 456 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 161/459 (35%) |
Glrb | NP_445748.1 | LIC | 43..495 | CDD:273305 | 161/459 (35%) |
LGIC_ECD_GlyR_beta | 79..265 | CDD:349811 | 78/187 (42%) | ||
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 | 247..253 | 2/5 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 175 | 1.000 | Domainoid score | I3542 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 341 | 1.000 | Inparanoid score | I2275 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D276914at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46272 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.070 |