DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and Glra2

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001344028.1 Gene:Glra2 / 237213 MGIID:95748 Length:452 Species:Mus musculus


Alignment Length:436 Identity:191/436 - (43%)
Similarity:258/436 - (59%) Gaps:45/436 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LDQILG-AGKYDARIRPSGINGTDGPAV-VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLK 99
            ||:::| ...|||||||:    ..||.| |..|||:.|...:.:.||:|.|.:..|:||.|.||.
Mouse    48 LDKLMGRTSGYDARIRPN----FKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLA 108

  Fly   100 FDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACP 164
            :.:.......|..:..:.:|.|||||:|||..:||::...|..:||..||.||||||::|||:||
Mouse   109 YSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCP 173

  Fly   165 MNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTN 227
            |:||.:|:|.|.|::::.|:|:|.|||:|.|....||||.:.|.||:|.|  ||.| .||....|
Mouse   174 MDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKEL-GYCTKHYN 237

  Fly   228 TGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTS 292
            ||:::|::|....:|:..|||||:|||..::||:||||||::..|.||||:||:||:|||.||:|
Mouse   238 TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSS 302

  Fly   293 GINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQAS 357
            |..||||.|||.||||:|..|||.|||.||||:|.||:.||       .|||.::.:||...|..
Mouse   303 GSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR-------QHKEFLRLRRRQKRQNK 360

  Fly   358 LDAASDLLDTDSNATFAMASQFARGGG---QQK---PLVRHPGDPLALEKRLQCEVHMQAPKRPN 416
            .:      |....:.|..:..   |.|   |.|   .:...|.:||.           |.||..:
Mouse   361 EE------DVTRESRFNFSGY---GMGHCLQMKDGTAVKATPANPLP-----------QPPKDAD 405

  Fly   417 CCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEED 462
            ..|   .||..|:||||.|||..|||.|.:||:.||.||.....||
Mouse   406 AIK---KKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKIIRHED 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 187/427 (44%)
Glra2NP_001344028.1 LIC 46..441 CDD:273305 187/427 (44%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 236..241 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3629
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 344 1.000 Inparanoid score I2310
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm44180
orthoMCL 1 0.900 - - OOG6_101785
Panther 1 1.100 - - LDO PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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