Protein Alignment GluClalpha and lgc-53

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: NP_741945.3
• Gene: lgc-53 / 188702
• WormBaseID: WBGene00020657
• Length: 497
• Species: Caenorhabditis elegans
• Alignment Length: 454
• Identity: 148/454 - (32%)
• Similarity: 235/454 - (51%)
• Gaps: 54/454 - (11%)

  Fly    17 CSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTM 81
            |:|       ||  |..:|.|.|.|....||....||. |.|:    |.|.:.|:||::|.:.:.
 Worm    77 CTA-------IN--ETLRKNLLQELFDDSYDKNNLPSA-NSTE----VIVELTVQSITEISEFSS 127

  Fly    82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLT--EANRVWMPDLFFSNEKEGHFHNIIMPNVYIR 144
            .:...:.|.:.|.|.||.|.|....||.::|.  :...:|.|::.|.|.|:...|.....|:.:.
 Worm   128 SFKADVWFSQIWRDPRLDFSDRNYCLKNISLASHKLPTMWSPNVCFVNSKKVEIHASPSQNILLL 192

  Fly   145 IFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQV----VK 205
            |||||:|..:.|:|||..|.::|..:|:|||.|:|...||.:.|.::..:|::.|.|.:    .|
 Worm   193 IFPNGTVWLNFRVSLTGPCKLDLTYFPMDRQSCNLVFESYSYNTAEVRIVWRDWDAVTIPDPDSK 257

  Fly   206 NLHLPRFTLEKFLTDYCNSKT--NTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWL 268
            |  ||.|.|...  ::.|:..  ..|.:..|:|...|:|.:.||::|.|:|..:.|.:||::||:
 Worm   258 N--LPDFELVNI--EHMNATLVYTAGLWDQLEVKFTFRRLYGYYVLQAYMPTYLSVFISWIAFWI 318

  Fly   269 DQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASR 333
            |..|:|||::|||::|:.:..|...|..:||.|||.||:|:|...|:.|:|.:|:|.|:|.:|.:
 Worm   319 DTKALPARITLGVSSLMALTFQFGNIVKNLPRVSYVKALDIWMFGCVGFIFLSLVELAVVGFADK 383

  Fly   334 --SGSNKANMHKENMKKKRRDLEQASLDAAS----DLLDTDSNATFAMASQFARGGGQQKPLVRH 392
              :...:.|..||.: ..|.|.||..|...|    .:.:|:|:||..:  |...|.|..:   |.
 Worm   384 LEAKRRRHNRCKEQL-MMRSDSEQQWLSRLSGQRPQVSETNSDATHTI--QINDGNGNVR---RR 442

  Fly   393 PGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYL 456
            ..:    |||.:..:.|::|...|            .::||.||...|||:|..||:.||..|:
 Worm   443 KSE----EKRQKLLLQMESPMFVN------------GEKIDEISAKLFPLLFTAFNIFYWFYYI 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	147/451 (33%)
lgc-53	NP_741945.3	LIC	87..489	CDD:273305	141/432 (33%)
		Neur_chan_LBD	88..294	CDD:280998	68/214 (32%)
		Neur_chan_memb	302..486	CDD:280999	68/205 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910