DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and glc-1

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_507090.1 Gene:glc-1 / 180086 WormBaseID:WBGene00001591 Length:461 Species:Caenorhabditis elegans


Alignment Length:432 Identity:203/432 - (46%)
Similarity:271/432 - (62%) Gaps:49/432 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDER 97
            :.|:|..:..:| ||.|:||...||  ||.||.||:.:|:|||||.|.||||.|||.||.|.|:|
 Worm    63 DSKILAHLFTSG-YDFRVRPPTDNG--GPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKR 124

  Fly    98 LKFD-DIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTL 161
            |.:. ...|:..::.||..:::||||.||.|||:.:.|.|..|||.|||..:|:||||:||||.|
 Worm   125 LSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVL 189

  Fly   162 ACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNL--HLPRFTLEKFLTDYCNS 224
            :|||.|:.||:|.|.||:.:|||.:||.|:.:||||..|:|:...|  .||.|.|....|.||.|
 Worm   190 SCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTS 254

  Fly   225 KTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMAT 289
            .||||.||||:..:..|||||:||:|:|||.||||||||||||.|:.|:||||:|||||||||..
 Worm   255 VTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTA 319

  Fly   290 QTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLE 354
            |::|||:.||||||.||||||.|.|:||:|.|||||||||:.    :||..:.    :|.|.:.|
 Worm   320 QSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHI----ANKQGVE----RKARTERE 376

  Fly   355 QASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCK 419
            :|.:....:|.:......|           .|:..||    .:.|.:|..              .
 Worm   377 KAEIPLLQNLHNDVPTKVF-----------NQEEKVR----TVPLNRRQM--------------N 412

  Fly   420 TWLSKFPTR------SKRIDVISRITFPLVFALFNLVYWSTY 455
            ::|:...|:      |||:|:|||..||::|.:||::|||.:
 Worm   413 SFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 203/430 (47%)
glc-1NP_507090.1 Neur_chan_LBD 64..273 CDD:280998 106/211 (50%)
LIC 65..452 CDD:273305 201/426 (47%)
Neur_chan_memb 281..451 CDD:280999 87/206 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1584
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20083
Inparanoid 1 1.050 383 1.000 Inparanoid score I1176
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm14182
orthoMCL 1 0.900 - - OOG6_101785
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.970

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