DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and avr-15

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001024076.1 Gene:avr-15 / 179834 WormBaseID:WBGene00000233 Length:657 Species:Caenorhabditis elegans


Alignment Length:432 Identity:210/432 - (48%)
Similarity:278/432 - (64%) Gaps:43/432 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EKKVLDQILGAGKYDARIRPSGINGT--DGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTD 95
            :.::|:.:|..| ||.|:||.|.:||  .||.||.||:.:|||||||:|.|||||||||||.|.|
 Worm   251 DTEILEHLLTRG-YDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVD 314

  Fly    96 ERLKFDDIQGRLK--YLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRIS 158
            :||.| .::|..:  :|.||....:||||.||.|||:.:.|.|..|||.||:..:|::|||:|||
 Worm   315 KRLSF-GVKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRIS 378

  Fly   159 LTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNL--HLPRFTLEKFLTDY 221
            |.|:|||:|:.||:|.|.|.:.:|||.:||.|:.::|||..|||:...|  .||.|.|....|.|
 Worm   379 LVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTY 443

  Fly   222 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLT 286
            |.||||||.||||:..:..:|:|||||:|:|||.||||||||||||:|:.||||||:||||||||
 Worm   444 CTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLT 508

  Fly   287 MATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRR 351
            |.||:|||||.||||:|.||||||.|.|:||:|.||||||.|.|.       ||....| |:.|.
 Worm   509 MTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFAWVTYI-------ANKQDAN-KRART 565

  Fly   352 DLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRLQCEVHMQAPKRPN 416
            :.|:|.|    ..|....|..:.                  |.: :|.::|....|.|.. ::.|
 Worm   566 EREKAEL----PFLQNSHNDVWV------------------PRE-VAEQEREVMTVRMNR-RQTN 606

  Fly   417 CCKTWL---SKFPTRSKRIDVISRITFPLVFALFNLVYWSTY 455
            ....|:   :::..:|||.|:|||:.||::|..||:.||:.|
 Worm   607 SVWKWIKTKTEWNDKSKRADLISRVMFPVLFLTFNISYWTHY 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 209/430 (49%)
avr-15NP_001024076.1 LIC 253..648 CDD:273305 209/428 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1584
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20083
Inparanoid 1 1.050 383 1.000 Inparanoid score I1176
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm14182
orthoMCL 1 0.900 - - OOG6_101785
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.970

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