Protein Alignment GluClalpha and lgc-49

DIOPT Version :9

• Sequence 1: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Sequence 2: NP_505841.2
• Gene: lgc-49 / 179547
• WormBaseID: WBGene00010741
• Length: 457
• Species: Caenorhabditis elegans
• Alignment Length: 445
• Identity: 133/445 - (29%)
• Similarity: 216/445 - (48%)
• Gaps: 67/445 - (15%)

  Fly    32 KEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDE 96
            ::..::|::|....|: :.|....||..    |:|..:|::|:.|:::|.::.:.:...|.|.|.
 Worm    53 RQPAIIDKLLNGTGYN-KFRIPNENGVP----VQVEFWVQAITSINEITNDFEMDIYINEMWLDP 112

  Fly    97 RLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISL 159
            .||||.:....:.|:::.  ..::|.|:..|.|.|....|:....||::.|:|||:|..:.|:::
 Worm   113 ALKFDHLNPCKQNLSVSHQVLEQLWTPNSCFVNSKFAEIHDSPFKNVFLMIYPNGTVWVNYRVNV 177

  Fly   160 TLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLW--KEGDPVQVVKNLHLPRFTLEKFLTDYC 222
            ...|.::|:|:|||.|.|.|...|:.:...::...|  |..:||.|...:.||.|.|.|..:...
 Worm   178 KGPCDLSLELFPLDIQECHLIYESFNYNNQEVRMRWNEKSAEPVSVTNKIRLPDFELIKIESTRI 242

  Fly   223 NSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTM 287
            ::....|.:..|.|.|:|:|.:.:|.:|.|:|..:.:.:||:||.|...|:|||..|||..||.|
 Worm   243 SAPYPAGMWDELHVKLVFERRYIWYFMQAYLPTYLTIFISWISFSLGTKAMPARTMLGVNALLAM 307

  Fly   288 ATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRS--GSNKANMHKENMKKKR 350
            ..|...|..:||.|||.||||||..|.:||:|.:|||.|:|.|.:::  ||.|...||:
 Worm   308 IFQFGNIMRNLPRVSYVKAIDVWMLVSMTFIFLSLLELAIVGYKTKNEEGSKKKCPHKK------ 366

  Fly   351 RDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRLQCEVHMQAPKRP 415
                         |||.                     ....|......|||....|..::.:
 Worm   367 -------------LLDN---------------------FEASPAGLCRYEKRFMLPVERRSAR-- 395

  Fly   416 NCCKTW--LSKFPT-------RSKRIDVISRITFPLVFALFNLVYWSTYLFREEE 461
                 |  :.:|..       ..::||.:|.|.||..||:||:||||.|..::.|
 Worm   396 -----WGGIIRFQVFQDFWNWSPEKIDRVSAIMFPACFAIFNIVYWSYYYNKKLE 445

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	131/437 (30%)
lgc-49	NP_505841.2	LIC	53..439	CDD:273305	131/437 (30%)
		Neur_chan_LBD	57..264	CDD:280998	60/211 (28%)
		Neur_chan_memb	272..436	CDD:280999	66/210 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910