DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and glc-3

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_504441.1 Gene:glc-3 / 178930 WormBaseID:WBGene00001593 Length:484 Species:Caenorhabditis elegans


Alignment Length:486 Identity:223/486 - (45%)
Similarity:283/486 - (58%) Gaps:62/486 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGIN----GTDGPAVVRVN 67
            ||.:   ...|.||           .:.:::.::||.| ||.|:||.|||    ||.|..:|.||
 Worm    15 FWIV---GGNCDAS-----------SDTEIIKKLLGKG-YDWRVRPPGINLTIPGTHGAVIVYVN 64

  Fly    68 IFVRSISKIDDVTMEYSVQLTFREQWTDERLKF----DDIQGRLKYLTLTEANRVWMPDLFFSNE 128
            :.:|||||||||.|||||||||||:|.|.||.:    |...   .:|.||...::||||.||.||
 Worm    65 MLIRSISKIDDVNMEYSVQLTFREEWVDGRLAYGFPGDSTP---DFLILTAGQQIWMPDSFFQNE 126

  Fly   129 KEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVF 193
            |:.|.|:|..|||.|||..:|.:|||:|||:.|:|||:|:.||:|.|.|.:.:|||.:|.||:.:
 Worm   127 KQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEY 191

  Fly   194 LWKEGDPVQVVKNLH--LPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCC 256
            .||:.||||:.|.||  ||.|.|....|..|.||||||.||||:..|..:|:|||||:|:|||..
 Worm   192 RWKKTDPVQLKKGLHSSLPSFELNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPST 256

  Fly   257 MLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGA 321
            |||||||||||||:|||||||:|||||||||.||.|||||.|||||||||||||.|.||||:|||
 Worm   257 MLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGA 321

  Fly   322 LLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASL---DAASDLLDTDSNATFAMASQ---FA 380
            |||||.|.|.|.....|.|.:..:......:.:||.:   ...:...:........:|..   :.
 Worm   322 LLEFAWVTYISSRSFYKRNKNCSSRNSLLIETKQALIIPNTVVAQFPEHPEEVEMGLAQAPDVWI 386

  Fly   381 RGGGQQKPL------VRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKF-------------- 425
            |..|..|.:      :.|..|..|       |:.:...|..|....|.:.|              
 Worm   387 RQSGNGKTVSRVNGHINHNNDEAA-------ELIIFDAKHKNRRFVWWTNFRNIRLIRWIRNRLN 444

  Fly   426 -PTRSKRIDVISRITFPLVFALFNLVYWSTY 455
             ...:||.|:|||:.||.:|..||.|||:.|
 Worm   445 VDDNAKRADLISRVLFPTLFVCFNFVYWTKY 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 222/484 (46%)
glc-3NP_504441.1 LIC 29..475 CDD:273305 217/456 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1584
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20083
Inparanoid 1 1.050 383 1.000 Inparanoid score I1176
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm14182
orthoMCL 1 0.900 - - OOG6_101785
Panther 1 1.100 - - LDO PTHR18945
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4995
SonicParanoid 1 1.000 - - X271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.000

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