DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and glc-2

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_491470.1 Gene:glc-2 / 172103 WormBaseID:WBGene00001592 Length:434 Species:Caenorhabditis elegans


Alignment Length:447 Identity:187/447 - (41%)
Similarity:251/447 - (56%) Gaps:73/447 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EKEKKVLDQILGAGKYDARIRPSGIN-GTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWT 94
            :.|:::|:.:|  ..||.|:||...| .|:|...|||||.:|.:||||.|.||||:||||||||.
 Worm    27 QSEQEILNALL--KNYDMRVRPPPANSSTEGAVNVRVNIMIRMLSKIDVVNMEYSIQLTFREQWI 89

  Fly    95 DERLKFDDI--QGRLKYLTLTEANR-VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 156
            |.||.::::  .....:||:....: :|:||.||..||..|.|.|.|.|:::||:|:|.:|||.|
 Worm    90 DPRLAYENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSR 154

  Fly   157 ISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNL--HLPRFTLEKFLT 219
            ||||.:|||.|:|||||.|.|:..:.||..|.||:::.|....|||:...:  .||.|.|:.:.|
 Worm   155 ISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNFILKNYTT 219

  Fly   220 DY-CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTT 283
            :. |.|.||||.|.||::.|||||:|||||:|:|.|..|:|||||||||:|..:...||:|||||
 Worm   220 NADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTT 284

  Fly   284 LLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKK 348
            ||||.|..|.|||.||||||.|.:|||.|.|.|||||||||:|.|:|......|..:..|...|.
 Worm   285 LLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVSYQDSVRQNDRSREKAARKA 349

  Fly   349 KRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRLQCEVHMQAPK 413
            :||..:...:||                                             ||:     
 Worm   350 QRRREKLEMVDA---------------------------------------------EVY----- 364

  Fly   414 RPNC-CKTWLSKFPTRSK-------------RIDVISRITFPLVFALFNLVYWSTYL 456
            :|.| |.|:.::...|.|             :||..:|...||.|..||::||.:.|
 Worm   365 QPPCTCHTFEARETFRDKVRRYFTKPDYLPAKIDFYARFVVPLAFLAFNVIYWVSCL 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 186/444 (42%)
glc-2NP_491470.1 LIC 29..419 CDD:273305 186/441 (42%)
Neur_chan_LBD 29..244 CDD:280998 101/216 (47%)
Neur_chan_memb 252..417 CDD:280999 76/214 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165747
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.960

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