DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and Glra1

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001277750.1 Gene:Glra1 / 14654 MGIID:95747 Length:457 Species:Mus musculus


Alignment Length:469 Identity:200/469 - (42%)
Similarity:269/469 - (57%) Gaps:37/469 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YFWAILYFASLCSASLANNAKINFREKEKKV-----LDQILG-AGKYDARIRPSGINGTDGPAV- 63
            |.|..:.|.||.::..|..|    |...|.:     ||:::| ...|||||||:    ..||.| 
Mouse    10 YLWETIVFFSLAASKEAEAA----RSAPKPMSPSDFLDKLMGRTSGYDARIRPN----FKGPPVN 66

  Fly    64 VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNE 128
            |..|||:.|...|.:.||:|.|.:..|:||.|.||.:::.......|..:..:.:|.|||||:||
Mouse    67 VSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANE 131

  Fly   129 KEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVF 193
            |..|||.|...|..:||..||:|||||||:|||||||:||.:|:|.|.|.:::.|:|:|.|||:|
Mouse   132 KGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIF 196

  Fly   194 LWKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCC 256
            .|:|...|||...|.||:|.|  ||.|. ||....|||:::|::.....:|:..|||||:|||..
Mouse   197 EWQEQGAVQVADGLTLPQFILKEEKDLR-YCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260

  Fly   257 MLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGA 321
            ::||:||:|||::..|.||||.||:||:|||.||:||..||||.|||.||||:|..|||.|||.|
Mouse   261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSA 325

  Fly   322 LLEFALVNYASRSGSNKANMHKE--NMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGG 384
            |||:|.||:.||       .|||  ..::|||..:...|:...|  |......|..:   |.|.|
Mouse   326 LLEYAAVNFVSR-------QHKELLRFRRKRRHHKSPMLNLFQD--DEGGEGRFNFS---AYGMG 378

  Fly   385 QQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSK-FPTRSKRIDVISRITFPLVFALFN 448
               |......|.::: |..........|..|:.....:.| |..|:|:||.||||.||:.|.:||
Mouse   379 ---PACLQAKDGISV-KGANNNNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFN 439

  Fly   449 LVYWSTYLFREEED 462
            :.||..|.....||
Mouse   440 MFYWIIYKIVRRED 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 197/460 (43%)
Glra1NP_001277750.1 LIC 7..446 CDD:273305 197/460 (43%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 230..235 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..410 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3629
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20083
Inparanoid 1 1.050 344 1.000 Inparanoid score I2310
Isobase 1 0.950 - 0 Normalized mean entropy S3705
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm44180
orthoMCL 1 0.900 - - OOG6_101785
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4995
SonicParanoid 1 1.000 - - X271
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.960

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