DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and Gabrg2

DIOPT Version :10

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_032099.1 Gene:Gabrg2 / 14406 MGIID:95623 Length:474 Species:Mus musculus


Alignment Length:8 Identity:4/8 - (50%)
Similarity:5/8 - (62%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TGALLPIP 33
            |..|.|:|
Mouse    61 TATLTPLP 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 4/8 (50%)
Gabrg2NP_032099.1 LIC 68..471 CDD:455710 1/1 (100%)
LGIC_ECD_GABAAR_G 89..270 CDD:349801
Cys-loop 189..203 CDD:349801
Blue background indicates that the domain is not in the aligned region.

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