DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and glra1

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_002940962.2 Gene:glra1 / 100498379 XenbaseID:XB-GENE-6035798 Length:450 Species:Xenopus tropicalis


Alignment Length:476 Identity:197/476 - (41%)
Similarity:270/476 - (56%) Gaps:54/476 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GHYFWAILYFASLCS-----ASLANNAKINFREKEKKVLDQILG-AGKYDARIRPSGINGTDGPA 62
            |.|.|..:.|.||.:     ||..::||:   ......||:::| ...|||||||:    ..||.
 Frog     8 GIYLWETVLFFSLAASKEVGASARSSAKL---MSPSDFLDKLMGKISGYDARIRPN----FKGPP 65

  Fly    63 V-VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFS 126
            | |..|||:.|...|.:.||:|.:.:..|:||.|.||.:.:.......|..:..:.:|.|||||:
 Frog    66 VNVSCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFA 130

  Fly   127 NEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDL 191
            |||..:||.|...|..:|||.||:||||||::|||||||:||.:|:|.|.|.:::.|:|:|.|||
 Frog   131 NEKGANFHEITTDNKLLRIFKNGNVLYSIRLTLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDL 195

  Fly   192 VFLWKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIP 254
            :|.|:|...|||.:.|.||:|.|  ||.|. ||....:||:::|::.....:|:..|||||:|||
 Frog   196 IFEWEEVGAVQVAEGLTLPQFILKEEKDLR-YCTKHYSTGKFTCIEARFHLERQMGYYLIQMYIP 259

  Fly   255 CCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVF 319
            ..::||:||||||::..|.||||.||:||:|||.||:||..||||.|||.||||:|..|||.|||
 Frog   260 SLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVF 324

  Fly   320 GALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGG 384
            .||||:|.||:.||       .|||.::.:||......        |.::...|:.|   |.|.|
 Frog   325 SALLEYAAVNFVSR-------QHKELLRFRRRRRHHKE--------DENAEGRFSFA---AYGMG 371

  Fly   385 QQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFP--------TRSKRIDVISRITFP 441
                       |..|:.:....:.......|......:||.|        :|:|:||.:|||.||
 Frog   372 -----------PACLQAKDGISMKGNNNNNPASSAQPVSKSPDEMRKLFISRAKKIDKVSRIGFP 425

  Fly   442 LVFALFNLVYWSTYLFREEED 462
            |||.:||..||..|.....||
 Frog   426 LVFLIFNTFYWIIYKIVRSED 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 194/467 (42%)
glra1XP_002940962.2 LIC 10..439 CDD:273305 193/465 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 174 1.000 Domainoid score I3617
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20083
Inparanoid 1 1.050 332 1.000 Inparanoid score I2384
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm49352
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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