DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluClalpha and glra3

DIOPT Version :9

Sequence 1:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:472 Identity:196/472 - (41%)
Similarity:271/472 - (57%) Gaps:52/472 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SGHYFWAILYFASLCSASLANNAKINFREKEKKV-----LDQILG-AGKYDARIRPSGINGTDGP 61
            ||.|||......||.:....::|    |.:...:     ||:::| ...|||||||:    ..||
 Frog    12 SGFYFWEAALLLSLVATKETDSA----RSRPSPMSPSDFLDKLMGRTSGYDARIRPN----FKGP 68

  Fly    62 AV-VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFF 125
            .| |..||||.|...|.:.||:|.:.:..|::|.|.||.:.:.......|..:..:.:|.|||||
 Frog    69 PVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFF 133

  Fly   126 SNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTND 190
            :|||..:||.:...|..:|||.:|:||||||::|||:|||:||.:|:|.|.|.:::.|:|:|.||
 Frog   134 ANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMND 198

  Fly   191 LVFLWKEGDPVQVVKNLHLPRFTL--EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYI 253
            |:|.|:|..|||:...|.||:|.|  ||.|. ||....|||:::|::|....:|:..|||||:||
 Frog   199 LIFEWQENGPVQIADGLTLPQFVLKEEKDLR-YCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYI 262

  Fly   254 PCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
            |..::||:||||||::..|.||||:||:||:|||.||:||..||||.|||.||||:|..|||.||
 Frog   263 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFV 327

  Fly   319 FGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGG 383
            |.||||:|.||:.||       .|||.::.:|:..:           |.|.:...:..|..|.|.
 Frog   328 FSALLEYAAVNFVSR-------QHKELLRFRRKRKK-----------DRDDDVRESRFSFTAYGM 374

  Fly   384 G---QQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFA 445
            |   |.|..| :|..||            .||..|...:.....|..|:|:||.:||..|||.|.
 Frog   375 GPCLQAKDGV-NPKGPL------------NAPPAPKTHEEMRKVFIDRAKKIDTLSRACFPLAFL 426

  Fly   446 LFNLVYWSTYLFREEED 462
            :||:.||..|.....||
 Frog   427 IFNIFYWVIYKILRHED 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 193/463 (42%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 193/463 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 174 1.000 Domainoid score I3617
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2384
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 1 1.000 - - FOG0000759
OrthoInspector 1 1.000 - - otm49352
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X271
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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