Sequence 1: | NP_001287408.1 | Gene: | GluClalpha / 42350 | FlyBaseID: | FBgn0024963 | Length: | 463 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933509.2 | Gene: | gabra2 / 100170583 | XenbaseID: | XB-GENE-1000398 | Length: | 451 | Species: | Xenopus tropicalis |
Alignment Length: | 467 | Identity: | 170/467 - (36%) |
---|---|---|---|
Similarity: | 253/467 - (54%) | Gaps: | 53/467 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 YFWAILYFAS--LCSASLANNAKIN---FREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Fly 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNE 128
Fly 129 KEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVF 193
Fly 194 LWKEGDPVQVV---KNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPC 255
Fly 256 CMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFG 320
Fly 321 ALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMA-SQFARGGG 384
Fly 385 QQKPLVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSK--FPTRSKRIDVISRITFPLVFALF 447
Fly 448 NLVYWSTYLFRE 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluClalpha | NP_001287408.1 | LIC | 3..455 | CDD:273305 | 165/461 (36%) |
gabra2 | XP_002933509.2 | LIC | 12..437 | CDD:273305 | 165/461 (36%) |
LGIC_ECD_GABAAR_A2 | 48..250 | CDD:349836 | 72/209 (34%) | ||
Cys-loop | 167..181 | CDD:349836 | 6/13 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11456 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |