DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7432 and st14a

DIOPT Version :10

Sequence 1:NP_650825.2 Gene:CG7432 / 42347 FlyBaseID:FBgn0038727 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001035441.2 Gene:st14a / 678603 ZFINID:ZDB-GENE-030131-6496 Length:834 Species:Danio rerio


Alignment Length:829 Identity:200/829 - (24%)
Similarity:295/829 - (35%) Gaps:212/829 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HLTNDASFFQPHLHDRRLGRQLIEDLAES------QSSASSVS-------SGSSQSGSAYEDDDD 90
            |..||....:.:....|:..:...|..|:      |:.|..||       |.|||....|.  ..
Zfish    68 HFRNDLKLQKIYTGSFRITNEAFVDAYENPQSPEFQNLADKVSTQLKLMYSESSQLSKYYV--TS 130

  Fly    91 DVEGSSE-----YYDSD-------EEQSEGSNESLPRLLSQSTFNRISETLGALNHVGHMLVDIT 143
            .|:..||     ||:|:       |...:.:..:|....|.....::||..|:|     :|..:.
Zfish   131 RVQAFSEGSVIAYYESEFAVPAAHEAAVDQAVSNLSEKYSSGKARKVSEQQGSL-----VLDSVV 190

  Fly   144 RGGQDQAKMEGAEKSEDTSQDNSQSGGSSSATASASSTTEVVPSSTS---SPRGN---------- 195
            ....|:..:..|..|  |..:...|........|........||:|.   ..||:          
Zfish   191 SSALDKRLISKARSS--TRYNKHTSRFVEDIIFSPGFPDSPYPSNTFVQWQLRGDPDHVLKLTFD 253

  Fly   196 --------SEQLPGVSDKLM-----------------DPLPITLSANSLLPA----------GKP 225
                    |.....|.|.|:                 |||....|.|.:|..          |..
Zfish   254 TFNLEQNCSNDFLRVYDSLVALDKFIMAEKCGYYSPSDPLSFISSRNVMLVTLVTNEEGAYPGFR 318

  Fly   226 ANLSVIQVAT---KRIGMDD--SAPMFVE----------------NKELKLKKKKKKNKNKQKVK 269
            |.:|.||..|   :.||...  ::|.|.:                .|.:|||..      |..|.
Zfish   319 ARVSQIQAVTCGGRMIGNSGIFTSPNFPDYYPPNITCQWYIEVPAGKFIKLKFP------KIMVS 377

  Fly   270 KPSE-EGVLVPVAQGAQQSQQKIKIPTTPRTTTTSTTTEAPITLTPLDQLAEASD-EAGTGKDVE 332
            ..|| .|..|.|...::...|::....|..:.|.:...           ::::|: :.|.....|
Zfish   378 TGSECHGDFVEVVGQSKLCGQQLNTIVTVNSNTATVRF-----------VSDSSNVDRGFSATFE 431

  Fly   333 NY----------------CKTPSGR---RGRCEDLS-----SCPALLLNLSSLRESLCFKSLYVP 373
            :|                |..||.|   ...|.|.|     .|.|.::...:             
Zfish   432 DYSPSDPCQDLFLCNNKRCVKPSMRCDGWNDCGDTSDEQNCQCDAKMIQCKN------------- 483

  Fly   374 GVCCPI---------SSSSTVLTTQKPLRLTTRPTT-TTSTTKATQPTKK----------STVRP 418
            |:|.|:         ...||     ..|....|... .....|.....:|          |....
Zfish   484 GLCKPMFWRCDGVDDCGDST-----DELNCGCRADQFKCKNDKCISEKQKCDGKDDCNDGSDEEG 543

  Fly   419 TTRPTSGLV---LIPQKKPPTTTTTTTTEVPLEPEGLDEIGNNIVDPDE----CGQQEYSTGRIV 476
            ..|..|.||   |....|       ..|:...|.:|.|:.|:|   .||    ||.:.|...|||
Zfish   544 CARTDSCLVSTFLCGNSK-------CITKPNPECDGQDDCGDN---SDESNCNCGTKAYKKSRIV 598

  Fly   477 GGVEAPNGQWPWMAAIFLHGPKRTEFWCGGSLIGTKYILTAAHCTRDS-RQKPFAARQFTVRLGD 540
            ||.:|..|::||..::.:   |.....||||:|..::|:|||||.:|. :.|......:.|.|| 
Zfish   599 GGQDAFEGEFPWQVSLHI---KNIAHVCGGSIINERWIVTAAHCVQDDVKIKYSQPGTWEVFLG- 659

  Fly   541 IDLSTDAEPSDPVTFAVKEVRTHERFSRIGFYNDIAILVLDKPVRKSKYVIPVCLPKGIRMPPKE 605
              |.:..:........:|:|..|..::...:.||||::.::.||..|..:.|||||......|  
Zfish   660 --LHSQKDKLTATKRLLKQVIPHPYYNAYTYDNDIALMEMESPVTFSDTIRPVCLPTATDTFP-- 720

  Fly   606 RLPGRRATVVGWGTTYYGGKESTSQRQAELPIWRNEDCDRSYFQPINENFICAGYSDGGVDACQG 670
              .|....:.|||.|..||..:|..::||:.|..:..|::.....|.....|||...||||||||
Zfish   721 --AGTSVFISGWGATREGGSGATVLQKAEVRIINSTVCNQLMGGQITSRMTCAGVLSGGVDACQG 783

  Fly   671 DSGGPLMMRYDSHWVQLGVVSFGNKCGEPGYPGVYTRVTEYLDWIRDHT 719
            ||||||...........||||:|:.|.....||:|:.|.::..||::.|
Zfish   784 DSGGPLSFPSGKRMFLAGVVSWGDGCARRNKPGIYSNVPKFRAWIKEKT 832

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7432NP_650825.2 CLIP 335..378 CDD:197829 11/50 (22%)
Tryp_SPc 475..718 CDD:238113 84/243 (35%)