DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31219 and svh-1

DIOPT Version :9

Sequence 1:NP_001097837.1 Gene:CG31219 / 42344 FlyBaseID:FBgn0051219 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:347 Identity:90/347 - (25%)
Similarity:142/347 - (40%) Gaps:71/347 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STNSDCYPGEKYVYLYECPHVYTAGRSRTLMREYDMDAWLLFGQRICCPPPGNRLPSTEICG--- 81
            |||:....|    |...|....:..||.:..|.          .||.|... |.:.|...||   
 Worm   648 STNATISSG----YNVNCDVDCSIRRSSSCTRH----------ARISCISQ-NGMSSASQCGLRY 697

  Fly    82 --------QSLSTYRMVGGSEARPNGYPWMAMLLYLNTTTLEILPFCAGSLINNRYVLTSAHCVN 138
                    ......|:|||.|..|..:||.|.|....|..    ..|..|:::..:::|:|||..
 Worm   698 VEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKA----HHCGASILDKTHLITAAHCFE 758

  Fly   139 GIPRDLSLKSVRLGEHDITYDPAYNPDCRDQDNQCALPNLEI-KLEKIIVHGLFSSISNRNIEYD 202
                    :..|:..:::...        |.||.....|.:| .|::|..:.|:..|    ..:|
 Worm   759 --------EDERVSSYEVVVG--------DWDNNQTDGNEQIFYLQRIHFYPLYKDI----FSHD 803

  Fly   203 IALLRLKMP-VRYRTGIMPICIPKHGFF--AKSKLEIAGWGKTNEGQFSQVLMHGFIRERSIAVC 264
            ||:|.:..| :.:.....|||:|...|.  ...:..::|||       |..|.:....:.::...
 Worm   804 IAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWG-------SMGLRYAERLQAALIPI 861

  Fly   265 ALRFP-------YLDLNQSLQICAGGYD-GVDTCQGDSGGPLMVTMDNSSVYLAGITTYGSKNCG 321
            ..||.       |..:::| ..|||..: |:|:||||||||.....::.:..|||:.::|. .|.
 Worm   862 INRFDCVNSSQIYSSMSRS-AFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGD-GCA 924

  Fly   322 QIGIPGIYTRTSAFLPWIKAVL 343
            |...|||||..:.:|.||.|::
 Worm   925 QKKQPGIYTMVAPYLSWISAII 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31219NP_001097837.1 Tryp_SPc 88..339 CDD:214473 71/262 (27%)
Tryp_SPc 90..342 CDD:238113 72/263 (27%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996 11/46 (24%)
Tryp_SPc 713..945 CDD:238113 72/264 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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