DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6195 and gtp1

DIOPT Version :9

Sequence 1:NP_650822.1 Gene:CG6195 / 42343 FlyBaseID:FBgn0038723 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_595225.2 Gene:gtp1 / 2540303 PomBaseID:SPBC354.01 Length:363 Species:Schizosaccharomyces pombe


Alignment Length:364 Identity:237/364 - (65%)
Similarity:287/364 - (78%) Gaps:2/364 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGILEKIAEIEREIARTQKNKATEYHLGLLKAKLAKYRSQLLEP-SKKGEKGDGFDVLKSGDARV 64
            ||:||||.|||.|:.||||||||||||||||.||||.|:||||| ||.|.||:||||||||||||
pombe     1 MGVLEKIQEIEAEMRRTQKNKATEYHLGLLKGKLAKLRAQLLEPTSKSGPKGEGFDVLKSGDARV 65

  Fly    65 ALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEGAAQGKGRG 129
            |.||||||||||:||.:|||:|..|:|||||||.||||:||.||.||:||||||||||:||:| |
pombe    66 AFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEYDGAEIQMLDLPGIIEGASQGRG-G 129

  Fly   130 RQVIAVARTADLVLMMLDATKPNVHRELLERELESVGIRLNKRKPNIYFKQKKGGGLSFNATCSL 194
            ||.::.||||||:||:|||||....||.:|.|||.||||||::.||:....||.||:.||.|..|
pombe   130 RQAVSAARTADLILMVLDATKAADQREKIEYELEQVGIRLNRQPPNVTLTIKKNGGIKFNHTVPL 194

  Fly   195 TRCNEKMVQTILHSFKIFNAEVLFREDCTEDEFIDVVTANRVYLPCLYVYNKIDQISIEEVDRLA 259
            |..:.||...|||.::|.||::|.|||.|.|:|||:|..||.|:.|||.|:|||.:|:|||||||
pombe   195 THMDYKMAYNILHEYRIHNADILIREDITVDDFIDLVMGNRRYINCLYCYSKIDAVSLEEVDRLA 259

  Fly   260 RQPNSIVVSCNMKLNLDYMMEALWEALQLIRVYTKKPGAPPDFDDGLILRKGVSVEHVCHAIHRT 324
            |.|.|:|:|||||||||::.|.:||.|.|.|:|||:.|..|||.:.||:|||.::|.||:.||||
pombe   260 RLPKSVVISCNMKLNLDFLKERIWEELNLYRIYTKRKGEMPDFSEALIVRKGSTIEQVCNRIHRT 324

  Fly   325 LAAQFKYALVWGTSTKYSPQRVGIAHVMADEDVIQVVKK 363
            ||.|.|||||||||.|:|||.||:.|.:.:.||:.:|.|
pombe   325 LAEQLKYALVWGTSAKHSPQVVGLNHRVEEGDVVTIVTK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6195NP_650822.1 Rbg1 1..363 CDD:224085 236/362 (65%)
gtp1NP_595225.2 Rbg1 1..363 CDD:224085 236/362 (65%)
P-loop_NTPase <5..119 CDD:304359 89/113 (79%)
DRG 63..294 CDD:206683 146/231 (63%)
TGS_DRG_C 288..362 CDD:133436 42/73 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 142 1.000 Domainoid score I1191
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1061
Inparanoid 1 1.050 472 1.000 Inparanoid score I274
OMA 1 1.010 - - QHG60797
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 1 1.000 - - oto101826
orthoMCL 1 0.900 - - OOG6_101808
Panther 1 1.100 - - LDO PTHR43127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R531
SonicParanoid 1 1.000 - - X2784
TreeFam 1 0.960 - -
1413.860

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