DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6195 and T28D6.6

DIOPT Version :9

Sequence 1:NP_650822.1 Gene:CG6195 / 42343 FlyBaseID:FBgn0038723 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001255126.1 Gene:T28D6.6 / 176563 WormBaseID:WBGene00012126 Length:366 Species:Caenorhabditis elegans


Alignment Length:367 Identity:204/367 - (55%)
Similarity:266/367 - (72%) Gaps:6/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGILEKIAEIEREIARTQKNKATEYHLGLLKAKLAKYRSQLLEP-SKKGEKGDGFDVLKSGDARV 64
            |.:|:|||:||.|:|||||||||..|||:|||||||.|..|:.| ...|..|:||||.|:||||:
 Worm     1 MSVLQKIADIEAEMARTQKNKATNAHLGILKAKLAKLRRDLITPKGGGGGPGEGFDVAKTGDARI 65

  Fly    65 ALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEGAAQGKGRG 129
            ..:|||||||||:|..|....||.|.|||||||.:||||.|:||.|||||||||||||..|||||
 Worm    66 GFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGRG 130

  Fly   130 RQVIAVARTADLVLMMLDATKPNVHRELLERELESVGIRLNKRKPNIYFKQKKGGGLSFNATCSL 194
            :||||||||..|:||:||..||..|::|||.|||..||||||:.|||.:|:|:.||::.......
 Worm   131 KQVIAVARTCSLILMVLDVMKPLQHKKLLEYELEGFGIRLNKQPPNIGYKRKEKGGINLTMLVPQ 195

  Fly   195 TRCNEKMVQTILHSFKIFNAEVLFREDCTEDEFIDVVTANRVYLPCLYVYNKIDQISIEEVDRLA 259
            :..:..:|::||..::|.||::..|.|.|.::.|||:..||:|:||:||.||||||||||:|.:.
 Worm   196 SELDLDLVKSILAEYRIHNADITLRYDATSEDLIDVIEGNRIYIPCIYVLNKIDQISIEELDIIY 260

  Fly   260 RQPNSIVVSCNMKLNLDYMMEALWEALQLIRVYTKKPGAPPDFDDGLIL---RKGVSVEHVCHAI 321
            |.|:::.:|.:.|.|.|.::|.:||.|.|||:|||..|..||:...::|   ||  |:|.:|..|
 Worm   261 RIPHTVPISAHHKWNFDDLLEKVWEYLNLIRIYTKPKGQLPDYSQPIVLNAERK--SIEDLCTKI 323

  Fly   322 HRTLAAQFKYALVWGTSTKYSPQRVGIAHVMADEDVIQVVKK 363
            |::|...||.|||||.|.|::|||||..||:.||||:||:||
 Worm   324 HKSLQKDFKCALVWGASAKHNPQRVGRDHVLIDEDVVQVIKK 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6195NP_650822.1 Rbg1 1..363 CDD:224085 202/365 (55%)
T28D6.6NP_001255126.1 Rbg1 1..365 CDD:224085 202/365 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60797
OrthoDB 1 1.010 - - D348788at33208
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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