Sequence 1: | NP_650821.2 | Gene: | Nup58 / 42342 | FlyBaseID: | FBgn0038722 | Length: | 546 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012855.1 | Gene: | NUP100 / 853796 | SGDID: | S000001551 | Length: | 959 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 571 | Identity: | 127/571 - (22%) |
---|---|---|---|
Similarity: | 193/571 - (33%) | Gaps: | 153/571 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 ATGAFAFGARPATTTAPPPSFGAATST---PTFGAAPATTSLFAAPAATPAFGAPAAT--PAFGA 75
Fly 76 P-ASTPGFGATSTAAPAFGTAAATPAFGIPAAT--SAFGAPAATPAFGAAAATPAFGAPAATPAF 137
Fly 138 GAPAATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGTT 202
Fly 203 ATTAAAAMPASLSSGIGSFSFPKPQATTAASLNFNTTTTTATAQPFNTGLKLGTTNATTTLGGGG 267
Fly 268 IFSKPAGQAAAPAASTFVGLGGIDVTATQPKLGDNKQDGIKIKETQVPDEIIK----TVDGLKAY 328
Fly 329 IKQQKTISSDI---------------------GRT--STSKFTNVSHEITNLKWALQNMATLVEG 370
Fly 371 SNQQIRLMRQETVKAIQSLEMAQRTQDTPAGLQF-----ENNAPFQYFQCLVAKYEQDLIAFRQQ 430
Fly 431 IALTERHMHAISNPQSISPDDLKRGFRQL----NESFISLAGRLHEVHQRVEEHKEHYL------ 485
Fly 486 ---NLRRYRLRDTTNV------------FERID--NPPLPTVEPQRISSGP 519 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup58 | NP_650821.2 | PHA03247 | <25..195 | CDD:223021 | 47/177 (27%) |
Nucleoporin_FG2 | 136..>525 | CDD:374260 | 89/443 (20%) | ||
NUP100 | NP_012855.1 | Nucleoporin_FG2 | 54..>246 | CDD:406391 | |
ser_rich_anae_1 | <290..>566 | CDD:411418 | 63/242 (26%) | ||
Nucleoporin_FG | 429..509 | CDD:404514 | 26/105 (25%) | ||
Nucleoporin2 | 814..955 | CDD:397975 | 14/62 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |