DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup58 and NCOA5

DIOPT Version :10

Sequence 1:NP_650821.2 Gene:Nup58 / 42342 FlyBaseID:FBgn0038722 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_066018.1 Gene:NCOA5 / 57727 HGNCID:15909 Length:579 Species:Homo sapiens


Alignment Length:217 Identity:51/217 - (23%)
Similarity:87/217 - (40%) Gaps:50/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 AATPAFGAPAATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAP-- 194
            ::|.:...|.:....||.:     ||...||.|:  .|..: |.|.|:   |||..|||.|:.  
Human   377 SSTDSLPGPISRQPLGATS-----GASLKTQPSS--QPLQS-GQVLPS---ATPTPSAPPTSQQE 430

  Fly   195 ------PAFGFGTTATTAAAAMPASLSSGIGSFSFPKPQATTAASLNFNTTTTTATAQPFNTGLK 253
                  ..|..||....:::|.| |:::|    :.|....:|||:......:..:..||.:.   
Human   431 LQAKILSLFNSGTVTANSSSASP-SVAAG----NTPNQNFSTAANSQPQQRSQASGNQPPSI--- 487

  Fly   254 LGTTNATTTLG------GGGIFSKPAGQAAAPAASTFVGLGGIDVTATQPKLGDNKQDGIKIKET 312
            ||...:...:|      ..|:|.:|:.: .|||:         ::|:.:|.    ...||.....
Human   488 LGQGGSAQNMGPRPGAPSQGLFGQPSSR-LAPAS---------NMTSQRPV----SSTGINFDNP 538

  Fly   313 QVP---DEIIKTVDGLKAYIKQ 331
            .|.   |.:|::...|...:.|
Human   539 SVQKALDTLIQSGPALSHLVSQ 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup58NP_650821.2 PHA03247 <25..195 CDD:223021 20/70 (29%)
Nucleoporin_FG2 136..>525 CDD:435043 50/213 (23%)
NCOA5NP_066018.1 Transcription repression 1..158
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
PRK12678 <32..>135 CDD:237171
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..173
LXXLL motif 345..349
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..428 20/61 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..537 23/114 (20%)
Transcription activation 458..579 25/124 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..579 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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