Sequence 1: | NP_650821.2 | Gene: | Nup58 / 42342 | FlyBaseID: | FBgn0038722 | Length: | 546 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001274093.1 | Gene: | Nup98 / 269966 | MGIID: | 109404 | Length: | 1816 | Species: | Mus musculus |
Alignment Length: | 450 | Identity: | 116/450 - (25%) |
---|---|---|---|
Similarity: | 150/450 - (33%) | Gaps: | 158/450 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 TPTTNNAIGGATAATGAF---AFG-------------------------ARPATTTAPPPSFGAA 39
Fly 40 TSTPT--FGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPG-FGATSTAAPAFGTAAATPAF 101
Fly 102 GIPAATSA-------FGAPAATPAF---------------------------------------- 119
Fly 120 ------GAAAATPAFG-APA---ATPAFGAPAATSAFGAPAATTAFGAPASTQASAFGA-PAPAV 173
Fly 174 G--TVAPTFSFATPATSAPTTAPPAFGFGTTATTAAAAMPASLSSGIGSFSFPKPQATTAASLNF 236
Fly 237 NTTTTTATAQPFNTGLKL-----------GTT----NATTTLG------------GGGIF-SKP- 272
Fly 273 ------------------AGQA---AAPAASTF-VGLG---GIDVTATQPKLGDNKQDGI 307 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup58 | NP_650821.2 | PHA03247 | <25..195 | CDD:223021 | 60/232 (26%) |
Nucleoporin_FG2 | 136..>525 | CDD:374260 | 64/228 (28%) | ||
Nup98 | NP_001274093.1 | FG repeats 1 | 1..156 | 40/136 (29%) | |
Nucleoporin_FG | 40..149 | CDD:372653 | 30/109 (28%) | ||
GLEBS, interaction with RAE1. /evidence=ECO:0000250 | 157..213 | 3/55 (5%) | |||
FG repeats 2 | 214..480 | 71/254 (28%) | |||
Nucleoporin_FG | 239..332 | CDD:372653 | 30/104 (29%) | ||
Nucleoporin_FG | 329..466 | CDD:372653 | 35/128 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 512..535 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 663..682 | ||||
Nucleoporin2 | 740..880 | CDD:367810 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 886..937 | ||||
Nup96 | 1333..1622 | CDD:371903 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |