Sequence 1: | NP_650821.2 | Gene: | Nup58 / 42342 | FlyBaseID: | FBgn0038722 | Length: | 546 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367842.1 | Gene: | npp-10 / 175852 | WormBaseID: | WBGene00003796 | Length: | 1678 | Species: | Caenorhabditis elegans |
Alignment Length: | 785 | Identity: | 179/785 - (22%) |
---|---|---|---|
Similarity: | 270/785 - (34%) | Gaps: | 288/785 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 NNAIGGATAATGAFA-----------FGARPATTTAPPPSFGAATSTPT---FGAAPATTSLF-- 55
Fly 56 -----------------------------AAPAATPAFG-----------------APAATPAFG 74
Fly 75 A------------PAST--------------------------------------------PGFG 83
Fly 84 ATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFG---------- 138
Fly 139 -APAATSAFGA-PAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFG--- 198
Fly 199 --------FGTTATTA------AAAMPASLSSGIGSF--------SFPKP-QATTAASLNFNTTT 240
Fly 241 TTATAQPF------NTGLKLGTTNATTTLG------GGGIF----SKPAGQ-------------- 275
Fly 276 AAAPAASTFVGLGGIDVTATQP---KLGDNKQDGIKIKETQVPDEIIKTVDGLKAYIKQQKTISS 337
Fly 338 DIGRTSTSKFTNVSH-EITNLKWALQNMATLVEGSNQQIRLMRQETVKAIQ--SLEMAQRTQDTP 399
Fly 400 AGLQFENNAPFQYFQCLVAKYEQDLIAFRQQIALTERHMHAISNPQSISPDDLKRGFRQLNESF- 463
Fly 464 --ISLAGR-LHE---VHQRVEEHKEHYLN-----------LRRYRLR--------DTTNV--FER 501
Fly 502 IDNP-PLPTV-EPQR----ISSGPT------------------PFSNISALMN-----KSYAAAA 537
Fly 538 SSASN 542 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup58 | NP_650821.2 | PHA03247 | <25..195 | CDD:223021 | 66/288 (23%) |
Nucleoporin_FG2 | 136..>525 | CDD:374260 | 122/514 (24%) | ||
npp-10 | NP_001367842.1 | Nucleoporin_FG | 59..146 | CDD:404514 | 18/86 (21%) |
Nucleoporin_FG | 110..240 | CDD:404514 | 21/129 (16%) | ||
Nucleoporin_FG | 237..334 | CDD:404514 | 29/104 (28%) | ||
Nucleoporin_FG | 305..431 | CDD:404514 | 38/129 (29%) | ||
Nucleoporin_FG | 407..>487 | CDD:404514 | 24/80 (30%) | ||
Nucleoporin2 | 777..919 | CDD:397975 | |||
Nup96 | 1259..1512 | CDD:403363 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |