Sequence 1: | NP_650821.2 | Gene: | Nup58 / 42342 | FlyBaseID: | FBgn0038722 | Length: | 546 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001265682.1 | Gene: | nup98 / 100145055 | XenbaseID: | XB-GENE-6450416 | Length: | 1790 | Species: | Xenopus tropicalis |
Alignment Length: | 714 | Identity: | 178/714 - (24%) |
---|---|---|---|
Similarity: | 233/714 - (32%) | Gaps: | 246/714 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFTPTTNNAIG---GATAATGAF----AFGARPATT--------------------TAPPPSFGA 38
Fly 39 ------ATSTPT----FGAAPATT-SLFAA--------PAATPAFG--APAATPAFGAPASTPG- 81
Fly 82 FGATSTAAPAFGTAAA--------------TPAFGIPAATSAF---------------------- 110
Fly 111 ------------------------GAPAATPAFGAAAATPAFGAPAATPAFGAPAATSAFGAPAA 151
Fly 152 TTAFGAPASTQA------SAFGAPA--PAVGTVAPTFSFATPATSAPTTAPPAFGFGTTATTAAA 208
Fly 209 AMPASLSSGIGSFSFPKPQATTAASLNFNTTTTTATAQPFNTGLKL-GTTNATTTLGGGGIF-SK 271
Fly 272 PAG----QAAAPA-ASTFVGLGGIDVTATQPKLGDNKQD-----GIKIKETQVPDEIIKTVDGLK 326
Fly 327 AYIKQQKTISSDIGRTSTSKFTNVSHEITNLKWALQNMATLVEGSNQQIRLMRQETVKAIQSLEM 391
Fly 392 AQRTQDTPAGLQFENNAP------------------FQYFQCLVAKYE--QDLIAFR-------- 428
Fly 429 ------------QQIALTERHMHAISNPQS-ISPDDLKRGFRQLNESFISLAGRLHEVHQRVEEH 480
Fly 481 KEHYLNLRRYRLRDTTNVFER----IDN--PPLPTVEPQR---------------ISSGPTPFS 523 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup58 | NP_650821.2 | PHA03247 | <25..195 | CDD:223021 | 73/279 (26%) |
Nucleoporin_FG2 | 136..>525 | CDD:374260 | 116/470 (25%) | ||
nup98 | NP_001265682.1 | Nucleoporin_FG | 27..149 | CDD:290362 | 38/121 (31%) |
Nucleoporin_FG | <216..323 | CDD:290362 | 40/124 (32%) | ||
Nucleoporin_FG | 272..394 | CDD:290362 | 44/135 (33%) | ||
Nucleoporin_FG | 355..468 | CDD:290362 | 37/141 (26%) | ||
Nucleoporin2 | 727..866 | CDD:282016 | |||
Nup96 | 1307..1600 | CDD:288926 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |