DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment subdued and AT1G73020

DIOPT Version :10

Sequence 1:NP_001189248.1 Gene:subdued / 42340 FlyBaseID:FBgn0038721 Length:1099 Species:Drosophila melanogaster
Sequence 2:NP_177445.2 Gene:AT1G73020 / 843633 AraportID:AT1G73020 Length:665 Species:Arabidopsis thaliana


Alignment Length:828 Identity:183/828 - (22%)
Similarity:287/828 - (34%) Gaps:279/828 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 EDCVRSIDFVLAYRINAHEPTELENTEKRRVFEANLISQGLEVESSQKDQIWFVKIHAPLEVLRR 252
            |..|..:..|:..|:     .|.|..:...|....|..:|:.|:........|:|:.||.|:|..
plant     8 ERVVHEVAMVVPKRV-----LEEEEGDCVEVLVTELRKKGMVVDRVVGLAHEFLKVAAPSEILGN 67

  Fly   253 YAEILKLRMPMKESLCNLRISERSNRLRNAAHYLTNKIPGMSVVNRSTKSVFSSLKHVFQFFLRN 317
            .|..|.:|.|.:     |.|.            |..::.|.....|....:..|....|:.:...
plant    68 AAAELHIRKPTR-----LGID------------LPFEMQGSEAFIRQPDGLLFSWFERFRCYQHL 115

  Fly   318 IYVDEEIFPKRAHRFTAIYSRDKEYLFDIRQDCFFTTAVRSRIVEFILDRQRFPAKNQHDMAFGI 382
            ||   .|.....|        |.....|.|:.|:  ||..|.                      :
plant   116 IY---GIVNSGGH--------DVTLKLDGREFCW--TAGESL----------------------L 145

  Fly   383 ERLIAEGVYSAAYPLHDGEITETGTMRALLYKHWASVPKWYR--YQPLDDIKEYFGVKIGLYFAW 445
            .||.:|||....:|||| |:     .|..|.::||.  .|:.  .||:|.|..|||.|||:||::
plant   146 RRLESEGVIKQMFPLHD-EL-----KRKELLQNWAL--NWWNCTNQPIDQIYSYFGAKIGVYFSF 202

  Fly   446 LGYYTYMLLLASIVGVICFLYSWFSLKNYVPVKDICQSGNTNITMCPLCDWCNFWDLKETCNYAK 510
            ||.||..|:..:::|.|..:..:.||:                                      
plant   203 LGMYTQWLIFPALLGFIVQMVDFGSLQ-------------------------------------- 229

  Fly   511 VTYLIDNPSTVFFAVFMSFWATLFLELWKRYSAEITHRWDLT-------GFDVHEEHPRPQYLAR 568
               .:..||   |.|....||.|||:.|||.:|.:..||.:.       |:         ::|..
plant   230 ---FLALPS---FFVGTILWAALFLQFWKRKNAALLARWQINCLVGPSQGY---------RFLGM 279

  Fly   569 LEHIPPTRVDYVTNI-------KEPTVPF-W-----RMKLPATVFSFSVVLLL-IALAFVALLAV 619
            .....|...:.:.|:       ||....: |     |.:....|....:.|.| ..||:..:..:
plant   280 EWSSLPFPKELIKNLGNERAKEKEAYQRYEWFAYRKRFRNDVLVIMSIICLQLPFELAYAHIFEI 344

  Fly   620 VVYRMSMLAALKVGASPMTTSSAIVLATASAAFVNLCLLYILNYMYNHLAEYLTEL--------- 675
            :                  ||..|              .|:|..:|..:.:|||.|         
plant   345 I------------------TSDII--------------KYVLTAIYLLIIQYLTRLGGKVSVKLI 377

  Fly   676 --EMWRTQTQFDDSLTLKIYLLQFVNYYASIFYIAFFKGKFVGHPGEYNKLFDYRQEECSSGGCL 738
              |:..:.....:||..|::.|.|:..|..|||.......|:                     .|
plant   378 NREINESVEYRANSLIYKVFGLYFMQTYIGIFYHVLLHRNFM---------------------TL 421

  Fly   739 TELCIQLAIIMVGKQAFNTILE---VYLPMFWRKVLAIQVGLSRLFNNTPNPDKAKDERWMRD-- 798
            .::.||..||   .|.|.|:::   .||...:||.                  :|:.::.|.|  
plant   422 RQVLIQRLII---SQVFWTLMDGSLPYLKYSYRKY------------------RARTKKKMEDGS 465

  Fly   799 ---------------FK----------LLDWGARGLFPEYLEMVLQYGFVTIFVAAFPLAPFFAL 838
                           ||          |.|    |||.:.||:.||:|.:.:|..|||||...|.
plant   466 STGKIQIASRVEKEYFKPTYSASIGVELED----GLFDDSLELALQFGMIMMFACAFPLAFALAA 526

  Fly   839 LNNILEMRLDAKKLLTHHKRPVSQRVRDIGVWYRILDCIGKLSVITNGFIIAFTSD--------- 894
            ::|::|:|.:|.|||...:||:.:....||.|..|...:..:|:.||..::....|         
plant   527 VSNVMEIRTNALKLLVTLRRPLPRAAATIGAWLNIWQFLVVMSICTNSALLVCLYDQEGKWKIEP 591

  Fly   895 -MIPRLVYRHYVNKQGTLDGYLNFTLSEFKVIDSPTLYSLAGDLSNIT 941
             :...|:..|.:.       .|.|.||  :::.....:..|..:.|:|
plant   592 GLAAILIMEHVLL-------LLKFGLS--RLVPEEPAWVRASRVKNVT 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subduedNP_001189248.1 Anoct_dimer 186..428 CDD:465044 54/241 (22%)
Anoctamin 431..1007 CDD:461349 127/583 (22%)
AT1G73020NP_177445.2 Anoctamin 188..627 CDD:461349 125/578 (22%)

Return to query results.
Submit another query.