DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment subdued and LOC562630

DIOPT Version :9

Sequence 1:NP_001189248.1 Gene:subdued / 42340 FlyBaseID:FBgn0038721 Length:1099 Species:Drosophila melanogaster
Sequence 2:XP_001921968.4 Gene:LOC562630 / 562630 -ID:- Length:817 Species:Danio rerio


Alignment Length:889 Identity:277/889 - (31%)
Similarity:427/889 - (48%) Gaps:193/889 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 NTSLFFEDCVRSI--DFVLAYRINAHEPTELENTEKRRVFEANLISQGLEVES-SQKDQIWFVKI 243
            |.:|......||:  |:||..:.:..|.:  .:..||..|...|..:.|.|:. :..|:..|..|
Zfish    28 NENLSVVPVQRSLTYDYVLVAKTSDDENS--HSARKRNAFIQALKQKQLSVKKYTNYDEKMFYCI 90

  Fly   244 HAPLEVLRRYAEILKLRMPMKESLCNLRISERSNRLRNAAHYLTNKIPGMSVVNRSTKSVFSSLK 308
            .|...:...|..:||:     ...||....::                  ..|.:||:.      
Zfish    91 RAADSIFETYRYLLKV-----SDACNWSCEQK------------------GTVPQSTRI------ 126

  Fly   309 HVFQFFLRNIYVDEEIFPKRAHRFTAIYSRDKEYLFDIRQDCFFTTAVRSRIVEFILDRQRFPAK 373
            .|..|.:.:..:|.:..|              |||.|                            
Zfish   127 RVVDFIVHHTSIDTQGVP--------------EYLPD---------------------------- 149

  Fly   374 NQHDMAFGIERLIAEGVYSAAYPLHDGEITETGTMRALLYKHWASVPKWYRYQPLDDIKEYFGVK 438
                       |:.:.|:...:.||:....:.      |.|.||.....:|.||:.:::.|.|.|
Zfish   150 -----------LMKKDVFETYFCLHEKREQKE------LKKSWARWSATFRGQPITNVRNYLGEK 197

  Fly   439 IGLYFAWLGYYTYMLLLASIVGVICFLYSWFSLKNYVPVKDICQSGNTNITMCPLC-DWCNFWDL 502
            :.|||.|||:||::|:.||::|:|.|||..........::::|   |:|||||||| :.|..|:|
Zfish   198 VALYFLWLGWYTFLLIPASVIGIIVFLYGLAFYSTSPLIQEVC---NSNITMCPLCNNKCKVWNL 259

  Fly   503 KETCNYAKVTYLIDNPSTVFFAVFMSFWATLFLELWKRYSAEITHRWDLTGFDVHEEHPRPQYLA 567
            .:||.||||:.|.||..||.||:||:.|||:|||.|||:.:.....|.:..:...||        
Zfish   260 SDTCMYAKVSLLFDNAGTVAFAMFMAVWATVFLEFWKRHRSSFVCAWKVYDWCEEEE-------- 316

  Fly   568 RLEHIPPTRVDYVTNIK-EPTVPFWRMKLPATVFSFSVVLLLIALAFVALL----AVVVYRM--S 625
              |.|    ::.|.|.. ||     :|...:.:.| ::||.|:.|..:.::    |:||:|:  :
Zfish   317 --ELI----MEIVNNAACEP-----KMHRHSYLRS-TIVLALVTLMLLIIIGLTHALVVFRVIAT 369

  Fly   626 MLAALK-----VGASPMTTSSAIVLATASAAFVNLCLLYILNYMYNHLAEYLTELEMWRTQTQFD 685
            :|.|.|     :|.:..|.  |::|. |...::.:.::..:|.|   :|..|:|:|...:....:
Zfish   370 VLLAEKSQWQLIGDNSQTV--ALMLG-AVLHYITITVMTRVNCM---VAMKLSEIENKHSHAAIE 428

  Fly   686 DSLTLKIYLLQFVNYYASIFYIAFFKGKFVGHPGEYNKLFD-YRQEECSSGGCLTELCIQLAIIM 749
            .|.|:|:::.||...::|:.|.|||.|:..||||.|.|:.. :|.|||...||||:|.||::|||
Zfish   429 RSFTVKMFIFQFFTMFSSLIYTAFFLGRINGHPGGYVKISGIWRLEECHPSGCLTDLFIQMSIIM 493

  Fly   750 VGKQAFNTILEVYLPMF-------------------WRKVLAIQVGLSRLFNNTPNPDKAKDERW 795
            |.||.||.|.|...|.|                   ::|.....|..|.|.:|      .|.|..
Zfish   494 VLKQTFNNIFEYSGPWFRRWLNRKKNQKLLRRCLKCYKKECMDAVEASELCDN------CKLEDL 552

  Fly   796 MRDFKLLDWGARGLFPEYLEMVLQYGFVTIFVAAFPLAPFFALLNNILEMRLDAKKLLTHHKRPV 860
            .|::.|:......||.|:||||:|:.|.|||||||||||..||||||:|:||||.|:::..:|.|
Zfish   553 HRNYSLIQTDRFSLFNEFLEMVIQFSFTTIFVAAFPLAPLLALLNNIIEIRLDAIKMVSLERRLV 617

  Fly   861 SQRVRDIGVWYRILDCIGKLSVITNGFIIAFTSDMIPRLVYRHYV------NKQGT--LDGYLNF 917
            ..:..|||||..:|:.|..|:||.||.:|..:||.||||||::|.      |..|.  :.||:|.
Zfish   618 PTKANDIGVWTDVLEAISALAVIANGLVIGISSDFIPRLVYQYYYGPCASGNPAGVDCMVGYINN 682

  Fly   918 TLSEFKVIDSPT--------LYSLAGDLSNITTCRYTDFRLPPSSPEKYTLSSMFYIILACRLGF 974
            |||...|.|...        |.:.:|:  ::|.|||.|:|    |.|.::|::.|::|||.||.|
Zfish   683 TLSVANVSDQRVSEDFKPNQLITDSGE--SVTHCRYRDYR----SSEDFSLTNQFWVILASRLVF 741

  Fly   975 VVVFENFVALVMILVRWCIPDMSVELRDQIRREVYVTNEIIIDQ 1018
            :::||:.|.:...:..|.:|:..::          ||||.:.|:
Zfish   742 IILFEHVVVMFKCVTSWFVPNSPLD----------VTNERLFDK 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subduedNP_001189248.1 Anoct_dimer 186..428 CDD:292796 42/244 (17%)
Anoctamin 431..1007 CDD:282414 227/624 (36%)
LOC562630XP_001921968.4 Anoctamin 190..771 CDD:282414 230/631 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2514
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263362at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.