DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment subdued and Axs

DIOPT Version :9

Sequence 1:NP_001189248.1 Gene:subdued / 42340 FlyBaseID:FBgn0038721 Length:1099 Species:Drosophila melanogaster
Sequence 2:NP_476777.1 Gene:Axs / 32645 FlyBaseID:FBgn0000152 Length:646 Species:Drosophila melanogaster


Alignment Length:736 Identity:161/736 - (21%)
Similarity:282/736 - (38%) Gaps:207/736 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 ELENTEKRRVFEANLISQGLEVESSQKDQIWFVKIHAPLEVLRRYAEILKLRMPMKESLCNLRIS 273
            :||..:::|..::|...:||..::...|:...|.|......||...::.|:            |.
  Fly    28 KLEALQRQRTLDSNDGVEGLGADTEPFDKTHIVIIFTEKAKLRHCQDVEKI------------IQ 80

  Fly   274 ERSNRLRNAAHYLTNKIPGMSVVNRSTKSVFSSLKHVFQFFLRNIYVDEEIFPKRAHRFTAIYSR 338
            |...:..            :.:|.::.|.::.|..  ....||.....|      ..:.|..:|.
  Fly    81 EFGIQTT------------LEIVGKTEKYLYLSAS--VDTLLRLADAAE------LEKMTTTHSM 125

  Fly   339 DKEYLFDIRQDCFFTTAVRSRIVEFILDRQRFPAKNQHDMAFGIERLIAEGVYSAAYPLHDGEIT 403
            .|     ....|.....:.....|.||.....|...:..:..||:..:.:|.....:||||    
  Fly   126 QK-----FNHGCISDFLLPGMGKEQILRYCEIPVLIKDVIQDGIKSYVQKGYIEDMFPLHD---- 181

  Fly   404 ETGTMRALLYKHWASVPKWYRYQ--------PLDDIKEYFGVKIGLYFAWLGYYTYMLLLASIVG 460
                   :||..        |:.        |::||:.|||..|||||.::.:||..|:..|:.|
  Fly   182 -------ILYLE--------RFNWNLKRTKLPIEDIRNYFGSSIGLYFGFIEFYTKALIFPSLFG 231

  Fly   461 VICFLYSWFSLKNYVPVKDICQSGNTNITMCPLCDWCNFWDLKETCNYAKVTYLIDNPSTVFFAV 525
            ::.:::                  :.||::.     |:|             |::          
  Fly   232 ILQYVF------------------DLNISLV-----CSF-------------YVV---------- 250

  Fly   526 FMSFWATLFLELWKRYSAEITHRW---DLTGFDVHEEHPRPQYLARLEHIP---------PTRVD 578
                |.|:|||||||..|..::||   :::..|    .||..|..:|:..|         |.|..
  Fly   251 ----WTTIFLELWKRKCAGYSYRWGTIEMSSLD----KPRSAYTGQLKPDPITGKMTLHYPMRYT 307

  Fly   579 YVTNIKEPTVPFWRMKLPATVFSFSVVL-LLIALAFVALLAVVVYRMSMLAALKVGASPMTTSSA 642
            |               |.....|:.||| .::|..:.||     |:..:.|.:.....|.:....
  Fly   308 Y---------------LQMYCISYPVVLGCVVAAGWFAL-----YQFQIEAEVLADFGPDSWLLY 352

  Fly   643 IVLATASAAFVNLCLLYILNYMYNHLAEYLTELEMWRTQTQFDDSLTLKIYLLQFVNYYASIFYI 707
            :.:...|.      |:.|.::.|..||.:||.||..||::|:|.....|:.|.:.||.:.|.|||
  Fly   353 VPVIVQSV------LIAIFSWAYEKLATFLTNLENHRTRSQYDRHRVNKLMLFEIVNNFFSQFYI 411

  Fly   708 AFFKGKFVGHPGEYNKLFDYRQEECSSGGCLTELCIQLAIIM-------VGKQAFNTILEVYLPM 765
            ||.             |.|.||.:       .:|.:||.:..       :|......:.:.|...
  Fly   412 AFV-------------LHDLRQLK-------YQLMMQLLVFQLLCIAQEIGIPLLAVLRQKYAEF 456

  Fly   766 FWRKVLAIQVGLSRLFNNTPNPDKAKDERWMRDFKLLDWGARGLFPEYLEMVLQYGFVTIFVAAF 830
            ..|:|...::   |..::.|..:::..|..:.::       ...:.:||::.:|:|||.:|.|..
  Fly   457 RHREVAEEKL---RSISDLPRYEQSFYESGLDEY-------HSTYEDYLQVCIQFGFVVLFAAVA 511

  Fly   831 PLAPFFALLNNILEMRLDAKKLLTHHKRPVSQRVRDIGVWYRILDCIGKLSVITN-GFIIA---- 890
            |.|...|||||:..:.:|..||....|||.::|.::||.|....:.:..:|:::| |.:..    
  Fly   512 PFAAIGALLNNVFAVHIDMWKLCNIFKRPFARRAKNIGAWQLAFELLSVMSLLSNCGLLFLQPNV 576

  Fly   891 --FTSDMIPR------LVYRH 903
              |.|..:|.      :::.|
  Fly   577 KDFFSHWLPSVPDLSFVIFEH 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subduedNP_001189248.1 Anoct_dimer 186..428 CDD:292796 38/226 (17%)
Anoctamin 431..1007 CDD:282414 121/506 (24%)
AxsNP_476777.1 Anoctamin 202..623 CDD:282414 121/506 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437683
Domainoid 1 1.000 52 1.000 Domainoid score I2829
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263362at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12308
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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