DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment subdued and LOC100490855

DIOPT Version :9

Sequence 1:NP_001189248.1 Gene:subdued / 42340 FlyBaseID:FBgn0038721 Length:1099 Species:Drosophila melanogaster
Sequence 2:XP_031756610.1 Gene:LOC100490855 / 100490855 -ID:- Length:798 Species:Xenopus tropicalis


Alignment Length:851 Identity:284/851 - (33%)
Similarity:419/851 - (49%) Gaps:149/851 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 PREFYQRGEINTSLF-----FEDCVRSIDFVLAYRINAHEPTELENTE--KRRVFEANLISQGLE 229
            |..|...|..:|...     ..|...:.|:||..:     ||..::.|  ||:.:.:.|:.:|.:
 Frog    16 PHSFLSYGTSHTQFLLAPSHMHDPDINWDYVLVCK-----PTSTDSPEEQKRQHYISVLLKKGFK 75

  Fly   230 VESSQKDQIWFVKIHAPLEVLRRYAEILKLRMPMKESLCNLRISERSNRLRNAAHYLTNKIPGMS 294
            .:..:..::.|..:.||.::..:|..:                                      
 Frog    76 TKKVRDGKVTFYGVRAPTDIFHKYVRL-------------------------------------- 102

  Fly   295 VVNRSTKSVFSSLKHVFQFFLRNIYVDEEIFPKRAHRFTAIYSRDKEYLFDIRQDCFFTTAVRSR 359
                                |.|        |.:.|  |:|.|.             .:...|.|
 Frog   103 --------------------LHN--------PDKGH--TSIESP-------------VSPTSRIR 124

  Fly   360 IVEFILDRQRFPAKNQHDMAFGIERLIAEGVYSAAYPLHDGEITETGTMRALLYKHWASVPKW-- 422
            ||.|||.......:.:.:.   ::.||...|:.||:|||    |.....|..|.|.||   :|  
 Frog   125 IVHFILHNTAILFRGKEEK---LQDLIKTQVFEAAFPLH----TRKDQTREGLKKKWA---RWRD 179

  Fly   423 -YRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLLASIVGVICFLYSWFSLKNYVPVKDICQSGNT 486
             ...||:::|:.|:|.|:.|||||||:||.|||.|::||:|.|.|.:....|....::||.:.||
 Frog   180 IIYVQPIEEIRAYYGEKVALYFAWLGWYTIMLLYAAVVGLIVFFYGFVHFDNSQISQEICTANNT 244

  Fly   487 NITMCPLCDW-CNFWDLKETCNYAKVTYLIDNPSTVFFAVFMSFWATLFLELWKRYSAEITHRWD 550
              .||||||. |.:|.|.:||.|||||:|.||..|||||:||:.|||:|||||||..|.....|:
 Frog   245 --LMCPLCDQNCPYWPLSDTCTYAKVTHLFDNEGTVFFAMFMAVWATVFLELWKRARANTVSGWN 307

  Fly   551 LTGFDVHEEHPRPQYLARLEHIPPTRVDYVTNIKEPTVPFWRMKLPATVFSFSVVLLLIALAFVA 615
            |..:|..||.     || ||.|.    |....||:....:||          |:.:||.|...:|
 Frog   308 LYNWDEDEEE-----LA-LELIN----DPECTIKKHEHSYWR----------SMAVLLGAAVVIA 352

  Fly   616 LL-----AVVVYRMSMLAALKVGASPMTTSSAIVLATASAAFVNLCLLYILNYMYNHLAEYLTEL 675
            :|     |:|:||:.:..:....:.......|...|..|.|.::...:.|:..:...:|.||..|
 Frog   353 VLIGIAQALVIYRVVVTVSFMRSSWEFLREHANTAAVMSGAVLHYLTIVIMTKVNRVIAGYLCNL 417

  Fly   676 EMWRTQTQFDDSLTLKIYLLQFVNYYASIFYIAFFKGKFVGHPGEYNKLF-DYRQEECSSGGCLT 739
            |..||.|:.::|.|.|::..|||.:::|:||:|||.|:..|:||.|.::. .:|.|||...||:|
 Frog   418 EKPRTFTERENSFTTKVFTFQFVTHFSSLFYVAFFLGRINGYPGNYVRIAGQWRLEECHPSGCIT 482

  Fly   740 ELCIQLAIIMVGKQAFNTILEVYLPMFWRKVLAIQVGLSRLFNNTPNPDKAKDERWMRDFKLLDW 804
            :|.||:.:|||.||..:..:|...|.|..|...::....|:.....:.|.|. |.|..:::|...
 Frog   483 DLFIQMCVIMVLKQTLSNCVEYLSPYFSYKWRLMKDRRCRVHGEDGSEDSAA-ECWRTNYRLGAV 546

  Fly   805 GARGLFPEYLEMVLQYGFVTIFVAAFPLAPFFALLNNILEMRLDAKKLLTHHKRPVSQRVRDIGV 869
            ....||.|:||||:||.|.|||||||||||..|.|||:||:||||.|:....:|.|.::..|||:
 Frog   547 HVFSLFDEFLEMVIQYSFTTIFVAAFPLAPVLAFLNNVLEIRLDAIKMTRLQRRFVPRKANDIGI 611

  Fly   870 WYRILDCIGKLSVITNGFIIAFTSDMIPRLVYRHYVN--KQGT------LDGYLNFTLSEFKVID 926
            |.::|:.:|.|:|||||.:||.|||.||||:|.:...  ..||      |.||::.:||.|...|
 Frog   612 WLQVLEAVGVLAVITNGLVIAVTSDFIPRLIYLYVYGPCANGTTEGINCLSGYVDSSLSVFYTKD 676

  Fly   927 SPTLYSLAGDL-SNITTCRYTDFRLPPSSPEKYTLSSMFYIILACRLGFVVVFENFVALVMILVR 990
            ...|..::..| :|:|.|||.|:|    |...|:.|:.|:.|.|.||||::|||:....:..:..
 Frog   677 FEDLTQVSRSLYTNVTECRYRDYR----SAADYSFSTQFWHIFAARLGFLIVFEHVAVCIKFVAA 737

  Fly   991 WCIPDM 996
            |.:||:
 Frog   738 WFVPDI 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subduedNP_001189248.1 Anoct_dimer 186..428 CDD:292796 45/251 (18%)
Anoctamin 431..1007 CDD:282414 234/582 (40%)
LOC100490855XP_031756610.1 Anoct_dimer 44..186 CDD:406563 44/237 (19%)
Anoctamin 189..757 CDD:398306 234/582 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263362at2759
OrthoFinder 1 1.000 - - FOG0000156
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X144
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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