DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6231 and Slc22a13l1

DIOPT Version :10

Sequence 1:NP_650819.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_008764922.2 Gene:Slc22a13l1 / 685081 RGDID:1583222 Length:621 Species:Rattus norvegicus


Alignment Length:550 Identity:135/550 - (24%)
Similarity:243/550 - (44%) Gaps:50/550 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FDQILAKCGDFNRYQFMILALFGFINIIVSMHYFTQTVISFVPDHWCYHDKLVNMTY--KEIGEI 65
            |.|::|:.|||..:|..:..|.|..|.:.:...|:|..:.....|.|....:.|.|:  ....::
  Rat     4 FAQVMAEVGDFGPFQVRVTILMGIPNFLSAFFVFSQVFMVLDEAHHCSVSWVKNHTFNLSAAEQL 68

  Fly    66 YAQFEN---------------PSCTRLDDINGHNVTVSSKACEK-WIYNYDFGYR--SMNTELNW 112
            .....|               |....|:||..|... .::||:. |.|..:   |  |:..|.:.
  Rat    69 AVSIPNDTAGRPESCLMFRPPPDSASLEDILSHRFN-ETQACDSGWDYPEN---RPPSLKNEFDL 129

  Fly   113 VCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTIFTKSVATFTLC 177
            ||:.....|..||:|..|.:||.|.:|.:.|.|||..:::|..........:|.|..|...:.:.
  Rat   130 VCERENLKRTSQSVFMAGLLVGALVFGPVCDWIGRRASILLQVLLSGITGVATAFVPSFELYMVL 194

  Fly   178 RFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLAVLVGHWQIYLACTS 242
            .|.|.:|.........|:|.|::.||.||..:.:|...| .|||:....||..|.:|::.....:
  Rat   195 CFFSAIAVAGYMMSTMILVSEWVGPSWRTRAMVLAQSNF-ALGLMALAGLAYGVRNWRLLQIIGT 258

  Fly   243 LPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFDEFRRHCQMTHEMLGG 307
            .||.|:|.|::|:.||.:||:::...:.|...:::.|..||..::.          ::.::::..
  Rat   259 TPIFLLVFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLAS----------ELLNQLVPE 313

  Fly   308 DDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCYDAVSRNVEGMGISPFIMFSLSALAVLPSSV 372
            ........||:||.|::||.||||.....|.:|.|..:...|...|:..::...:..:..:|:.:
  Rat   314 KTGPSGNALDLFRHPQLRKVTLILIAVWFVDSLLYYGLGFQVGDFGLDIYLTQVIFGVVEVPARL 378

  Fly   373 LLVLLQDRIGRKGMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQ 437
            ..:.:.:::|||.....:|.:.|:..    :.|.:...:...:..| |.:..:|..:.::.....
  Rat   379 SSIPMMEKLGRKWSQLCTLTLAGVMC----VIIIFIPGDLPTVATA-LAVVGKFASSAAFTISYV 438

  Fly   438 YATELIPTCVRGQGVAAVHVAGFAASFLAPYILWLGTFFKAAPSIILGVLFFAGSFVCLLLPETL 502
            |..||:||.:|..|:..|.:.......:.|.::.|..:.||.|.:|.|.|......:|.|||||.
  Rat   439 YTAELLPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHKAIPMLIFGSLPIGAGLLCALLPETR 503

  Fly   503 NRSLPTTIEEGEVFGKGERMFDFPCLHNKH 532
            .::|..|:::.|..|.          |.:|
  Rat   504 GQTLKDTLQDLEQGGP----------HGEH 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_650819.1 2A0119 11..509 CDD:273328 127/517 (25%)
Slc22a13l1XP_008764922.2 2A0119 12..510 CDD:273328 127/517 (25%)

Return to query results.
Submit another query.