DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and Sv2b

DIOPT Version :10

Sequence 1:NP_650819.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_705807.2 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus


Alignment Length:575 Identity:103/575 - (17%)
Similarity:187/575 - (32%) Gaps:202/575 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 NTELNWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTI--FTK 169
            :.|.:....|:.|..:| .:.::|.:.|....|.|:||:||...|.:|  ......|:::  |.:
Mouse   135 SAEKDMCLSSSKKGMLG-LIVYLGMMAGAFILGGLADKLGRKKVLSMS--LAINASFASLSSFVQ 196

  Fly   170 SVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLA-VLVGH 233
            ....|..||.|||:....:..:::....|::....|...|:. :|:|:..|.::...:| .::.|
Mouse   197 GYGAFLFCRLISGIGIGGSLPIVFAYFSEFLSREKRGEHLSW-LGIFWMTGGIYASAMAWSIIPH 260

  Fly   234 ---------------WQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRV----- 278
                           |::::...:||..:.::....:.||.::|:.....|.|.:.||:|     
Mouse   261 YGWGFSMGTNYHFHSWRVFVIVCALPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNM 325

  Fly   279 -AKFNGCRV-------SQADFDEF----------------------------RRHCQMTHEMLGG 307
             ||....:|       :....|||                            ..:|.|      |
Mouse   326 RAKGTPEKVFTVSHIKTPKQMDEFIEIQSSTGTWYQRWLVRFMTIFKQVWDNALYCVM------G 384

  Fly   308 DDKKQATLL-------------------DM---FRTPRMRKNTLILF------------------ 332
            ..:....:|                   ||   |:....:....:.|                  
Mouse   385 PYRMNTLILAVVWFTMALSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEHVHGATINFTMENQIH 449

  Fly   333 -------------------FKSMVITLCY-------DAVSRNV---------------------- 349
                               |:......||       |...:|.                      
Mouse   450 QHGKLVNDKFIKMYFKHVLFEDTFFDKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHKFINCRF 514

  Fly   350 ---------EGMGI-----SPFIMFSLS---ALAVLPSSVLLVLLQDRIGRKGMASGSLLVGGL- 396
                     ||..:     :.|:::.:|   :|:|||.:::..||.|||||..|..||:|:..: 
Mouse   515 INSTFLEQKEGCHMDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVC 579

  Fly   397 -----FTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYATELIPTCVRGQGVAAVH 456
                 |..:....|.:|       .|.|.|..|      ::.:......||.||..|......::
Mouse   580 CFFLFFGNSESAMIGWQ-------CLFCGTSIA------AWNALDVITVELYPTNQRATAFGILN 631

  Fly   457 -VAGFAA----SFLAPYILWLGTFFKAAPSIILGVLFFAGSFVCLLLPETLNRSL 506
             :..|.|    :..|.::    ...|..|.::.......|..:.|.||||..:.|
Mouse   632 GLCKFGAILGNTIFASFV----GITKVVPILLAAASLVGGGLIALRLPETREQVL 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_650819.1 2A0119 11..509 CDD:273328 103/575 (18%)
Sv2bNP_705807.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
synapt_SV2 8..683 CDD:130366 103/575 (18%)
Blue background indicates that the domain is not in the aligned region.

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