DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and Svopl

DIOPT Version :10

Sequence 1:NP_650819.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001418754.1 Gene:Svopl / 500085 RGDID:1566053 Length:494 Species:Rattus norvegicus


Alignment Length:463 Identity:100/463 - (21%)
Similarity:180/463 - (38%) Gaps:122/463 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 NWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTIFTKSVATFT 175
            ||      :.....::.|.|.:|.::.:|||:|:.||...|:||...|......|.|:.|...|.
  Rat    83 NW------QVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFV 141

  Fly   176 LCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLA------------ 228
            ..|.:.|.....:...: ||..|::....|        |....|..||  |||            
  Rat   142 FLRTMVGCGVSGHAQGL-IIKTEFLPTKYR--------GYMLPLSQVF--WLAGSLLIISMASVV 195

  Fly   229 -VLVGHWQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFD 292
             ..:| |:..:...|:|.:::::.:..:.|||::.|:..:...|:..|:.:||.|...:.:.   
  Rat   196 IPTIG-WRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEG--- 256

  Fly   293 EFRRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCYDAV------------ 345
                  ::...:|    :|:....|:..:..:| .||.::...:.|:..|..|            
  Rat   257 ------RLVEPIL----EKRGRFADLLESKYLR-TTLQIWIIWLGISFAYYGVILASAELLERDL 310

  Fly   346 ---SRN------VEGMG-------------ISP-----FIMFSLSALAVLPSSVLLVLLQDRIGR 383
               |::      ||.||             .:|     .|:.:|..:|:.|.::|.:   :.:||
  Rat   311 VCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGI---NFLGR 372

  Fly   384 K-------GMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYATE 441
            :       |..:...|:..:.|::||: |.:      ..:|..| :||.|.....      |..|
  Rat   373 RLSLSITMGCTALFFLLLNICTSSAGL-IGF------LFMLRAL-VAANFNTIYI------YTAE 423

  Fly   442 LIPTCVRGQGVAAVHVAGFAASFLAPYI---LWLGTFFKAAPSIILGVLFFAGSFVCLL----LP 499
            :.||.:|..|:..........:.:||:|   |...:|..|.      .||.:...||.:    ||
  Rat   424 VYPTPMRALGMGTSGSLCRIGAMVAPFISQVLMSASFLGAL------CLFSSVCVVCAISAFTLP 482

  Fly   500 -ETLNRSL 506
             ||..|:|
  Rat   483 IETKGRAL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_650819.1 2A0119 11..509 CDD:273328 100/463 (22%)
SvoplNP_001418754.1 MFS_SVOPL 49..482 CDD:341000 94/453 (21%)

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