DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and Svopl

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:463 Identity:100/463 - (21%)
Similarity:180/463 - (38%) Gaps:122/463 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 NWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTIFTKSVATFT 175
            ||      :.....::.|.|.:|.::.:|||:|:.||...|:||...|......|.|:.|...|.
  Rat    35 NW------QVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFV 93

  Fly   176 LCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLA------------ 228
            ..|.:.|.....:...: ||..|::....|        |....|..||  |||            
  Rat    94 FLRTMVGCGVSGHAQGL-IIKTEFLPTKYR--------GYMLPLSQVF--WLAGSLLIISMASVV 147

  Fly   229 -VLVGHWQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFD 292
             ..:| |:..:...|:|.:::::.:..:.|||::.|:..:...|:..|:.:||.|...:.:.   
  Rat   148 IPTIG-WRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEG--- 208

  Fly   293 EFRRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCYDAV------------ 345
                  ::...:|    :|:....|:..:..:| .||.::...:.|:..|..|            
  Rat   209 ------RLVEPIL----EKRGRFADLLESKYLR-TTLQIWIIWLGISFAYYGVILASAELLERDL 262

  Fly   346 ---SRN------VEGMG-------------ISP-----FIMFSLSALAVLPSSVLLVLLQDRIGR 383
               |::      ||.||             .:|     .|:.:|..:|:.|.::|.:   :.:||
  Rat   263 VCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGI---NFLGR 324

  Fly   384 K-------GMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYATE 441
            :       |..:...|:..:.|::||: |.:      ..:|..| :||.|.....      |..|
  Rat   325 RLSLSITMGCTALFFLLLNICTSSAGL-IGF------LFMLRAL-VAANFNTIYI------YTAE 375

  Fly   442 LIPTCVRGQGVAAVHVAGFAASFLAPYI---LWLGTFFKAAPSIILGVLFFAGSFVCLL----LP 499
            :.||.:|..|:..........:.:||:|   |...:|..|.      .||.:...||.:    ||
  Rat   376 VYPTPMRALGMGTSGSLCRIGAMVAPFISQVLMSASFLGAL------CLFSSVCVVCAISAFTLP 434

  Fly   500 -ETLNRSL 506
             ||..|:|
  Rat   435 IETKGRAL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 100/463 (22%)
MFS 125..499 CDD:119392 92/439 (21%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 94/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347239
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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