DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6231 and Slc22a28

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001013842.2 Gene:Slc22a28 / 434674 MGIID:3645714 Length:552 Species:Mus musculus


Alignment Length:556 Identity:136/556 - (24%)
Similarity:239/556 - (42%) Gaps:71/556 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFDQILAKCGDFNRYQFM----ILALFGFINIIVSMHYFTQTVISFVPDHWCYHDKLVNMTYKE 61
            |.|.::|.:.|...|:|.:    :|.|.|.:...::|..||    :.:|:|.|:...|.|.|..:
Mouse     1 MAFQELLNQVGSLGRFQILQISFVLFLVGLVVPHITMENFT----AAIPNHRCWAPILDNDTASD 61

  Fly    62 IGE--------------IYAQFENPSCTRLDDINGH----NVTVSSKA------C-EKWIYNYDF 101
            .|.              :.:......|.|......|    |.|.|::.      | :.|:|:...
Mouse    62 NGSRILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCVDGWVYDRSN 126

  Fly   102 GYRSMNTELNWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCG---FA-GD 162
            ...::.||.:.||:|.....:.:..|.||..:|.:..|.|||:.||  ..||:  |.   || .:
Mouse   127 FLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSDRFGR--KFILT--CALLQFAITE 187

  Fly   163 FSTIFTKSVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYC---LGLVFT 224
            ....|..|...:.|.||::|::.:.......:::||:..|..    |.|...|..|   :|.:..
Mouse   188 TCVAFAPSFFIYCLLRFLAGMSVEPISVNSNLLILEWTNPKF----LGMVAVLTSCAASIGYMIL 248

  Fly   225 PWLAVLVGHWQIYLACTSLPILLVVLYYFV----VQESAQWLVTRNDIDGAIVRLKRVAKFNGCR 285
            ..||.|...|.......|:||    .::|:    :.|||:||:..|.....:..|::||..||.:
Mouse   249 AGLAFLFRIWHHLQLAMSVPI----FFFFILTRWMSESARWLIVTNKPQKGLKELRKVAHMNGMK 309

  Fly   286 VSQADFDEFRRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCYDAVSRNVE 350
            .|............|.:|:...  |::::..|:|.||.:|....:|.|...:.|:....:|.:::
Mouse   310 NSGNTLTMEVVEASMKNELEAA--KRKSSPRDLFHTPILRNRICVLSFMRYLFTVSIFGLSLHLQ 372

  Fly   351 GMGISPFIM-FSLSALAVLPSSVLLVLLQDRIGRKGMASGSLLVGGLFTAAAGIAIAYQQHNHNA 414
            .:..:..:: |..|||.:| .||:...:.:.:||:......:.:.|:|...|    .:.......
Mouse   373 HLSTNIILLRFLSSALGIL-ISVIGHFVLNHMGRRITQLVLMSLRGIFMLTA----VFVPQEMQT 432

  Fly   415 ILLACLTIAARFG---VAISYESGSQYATELIPTCVRGQGVAAVHVAGFAASFLAPYILWLGTFF 476
            :.:..:|:||...   :.:|    :.:..||:||.:|..|:..:.:.|.:..||||..:.|.|:.
Mouse   433 LRIIVVTLAAALSSLCMCVS----NLHINELLPTTLRATGMGVIGMFGNSGLFLAPLFMLLATYS 493

  Fly   477 KAAPSIILGVLFFAGSFVCLLLPETLNRSLPTTIEE 512
            ...|.|..|.......|...|||||.|:.||.:|.:
Mouse   494 ANLPWIFYGGFSILYGFSVFLLPETKNQPLPDSIHD 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 132/541 (24%)
MFS 125..499 CDD:119392 95/388 (24%)
Slc22a28NP_001013842.2 2A0119 11..525 CDD:273328 131/540 (24%)
MFS 151..516 CDD:119392 95/387 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843966
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

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