DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6231 and Svopl

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_011239688.1 Gene:Svopl / 320590 MGIID:2444335 Length:544 Species:Mus musculus


Alignment Length:463 Identity:99/463 - (21%)
Similarity:180/463 - (38%) Gaps:122/463 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 NWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTIFTKSVATFT 175
            ||      :.....::.|.|.:|.::.:|||:|:.||...|:||...|......|.|:.|...|.
Mouse    83 NW------QVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFV 141

  Fly   176 LCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLA------------ 228
            ..|.:.|.....:...: ||..|::....|        |....|..||  |||            
Mouse   142 FLRTMVGCGVSGHAQGL-IIKTEFLPTKYR--------GYMLPLSQVF--WLAGSLLIISMASVV 195

  Fly   229 -VLVGHWQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFD 292
             ..:| |:..:...|:|.:::::.:..:.|||::.|:..:...|:..|:.:||.|...:.:.   
Mouse   196 IPTIG-WRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALNTLESIAKMNRSVMPEG--- 256

  Fly   293 EFRRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCY--------DAVSRNV 349
                  |:...:|    :|:....|:..:..:| .||.::...:.|:..|        :.:.|::
Mouse   257 ------QLVEPIL----EKRGRFADLLDSKYLR-TTLQIWIIWLGISFAYYGVILASAELLERDL 310

  Fly   350 ------------------EGMGISP-------------FIMFSLSALAVLPSSVLLVLLQDRIGR 383
                              .|.|:||             .|:.:|..:|:.|.::|.:   :.:||
Mouse   311 VCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSDYRTMIISTLGEIALNPLNILGI---NFLGR 372

  Fly   384 K-------GMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYATE 441
            :       |..:...|:..:.|::||: |.:      ..:|..| :||.|.....      |..|
Mouse   373 RLSLSITMGCTALFFLLLNICTSSAGL-IGF------LFMLRAL-VAANFNTIYI------YTAE 423

  Fly   442 LIPTCVRGQGVAAVHVAGFAASFLAPYI---LWLGTFFKAAPSIILGVLFFAGSFVCLL----LP 499
            :.||.:|..|:..........:.:||:|   |...:|..|.      .||.:...||.:    ||
Mouse   424 VYPTPMRAIGMGTSGSLCRIGAMVAPFISQVLMSASFLGAL------CLFSSVCVVCAISAFTLP 482

  Fly   500 -ETLNRSL 506
             ||..|:|
Mouse   483 IETKGRAL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 99/463 (21%)
MFS 125..499 CDD:119392 91/439 (21%)
SvoplXP_011239688.1 MFS_SVOPL 49..482 CDD:341000 93/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843814
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.