DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and oct-2

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:632 Identity:140/632 - (22%)
Similarity:243/632 - (38%) Gaps:131/632 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFDQILAKCGDFNRYQFMILALFGFINIIVSMHYFTQTVISFVPDHWC---------------- 49
            :||:.||...|..:.:|.::..:.....:..:|...:...:.:.|||||                
 Worm   154 IDFEGILQLIGGCSYWQIIVYLIISVQQVPHAMFNLSVVYMMYQPDHWCKIPFFNEESFSAELGY 218

  Fly    50 ---YHDKLVNMTY-------KEIGEI-----------YAQFENPSCTRLDDINGHNVTVSSKACE 93
               ..|:::|.|.       |:..|:           |...:.....::.|:   |.|.....|:
 Worm   219 TNYTWDQVLNSTIAFPRTFNKQRNELHHDQCHYFERDYVHIKLSPWAQVKDM---NATGKINRCK 280

  Fly    94 KWIYNYDFGYRSMNTELNWVCDSAY-KARIGQSLFFIGSVVGTLFYGLLSDKIGRVPAL----IL 153
            :|.|:.....|::.||.|.|||:.: :|.:..| :.:|.:||....|.:||:.||..|:    ||
 Worm   281 EWEYDTSVMDRTIVTEWNRVCDNNWSRAHVHMS-YSLGYLVGCFVGGFISDRYGRKTAITGFGIL 344

  Fly   154 SNFCGFAGDFSTIFTKSVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYC 218
            :...||.    ..::|....|.:.||:.....:......|::.:|......|::..::....:.|
 Worm   345 TMLFGFL----LTYSKEFEIFLVVRFLLAATNEAADLAAYVLCMEVTGTKYRSIVGSLIQAPWAC 405

  Fly   219 LGLVFTPWLAVLVGHW-QIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFN 282
             |..|...:|.|...| .|:|.|..|.|:.::|.|| :.||.:||:..|....|...::....:|
 Worm   406 -GYAFLALIAYLTKSWTMIHLICVLLHIISLMLLYF-LPESPRWLILNNKTKQAEKIIREACHYN 468

  Fly   283 GCR-------VSQADFDEFRRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITL 340
            ..|       |..|:..::.:|            .::.:...:||:..:|...::||...:...|
 Worm   469 KSRLPSDLGLVRHAEKKKWMKH------------NEKPSYFHLFRSSELRFRNVVLFIVWIATAL 521

  Fly   341 CYDAVSRNVEGMGI------SP---------FIMFSLSALAVLPSSVLLVLLQDRIGRKGMASGS 390
            .|       .||.|      ||         |:..:::....||:.|..|.|. |:|||......
 Worm   522 VY-------YGMVIALSDQSSPGRRVFDGNFFLNNAMAGAIELPTLVFCVFLL-RMGRKRSQMLV 578

  Fly   391 LLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYATELIPTCVRGQGVAAV 455
            |...|||...: :.:.|::.:..|::...|:.|...|   |:.....:.:||.||.||...|...
 Worm   579 LFGSGLFLLTS-VVMVYRKQSTLALIFMLLSKACIQG---SFNILYIFTSELNPTVVRNSAVGIS 639

  Fly   456 HVAGFAASFLAPYILWLG-TFFKAAPSIILGVLFFAGSFVCLLLPETLNRSLPTTI--------- 510
            .:.....:..:.||..|. ......|..|..........:.||||||....||.||         
 Worm   640 SMVARMGAGASGYIAILSDVTMPLVPMTIFACFSLLAGCLVLLLPETQGLPLPDTILDSVQMVKR 704

  Fly   511 -----------------EEGEVFGKGERMFDFPCLHNKHDDEESESE 540
                             ::.:.:| |:    .|...:..|:||.|.|
 Worm   705 NTKPCGTLSGTFLGGIDDDAQPYG-GK----LPPRVSSDDEEEEEEE 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 126/563 (22%)
MFS 125..499 CDD:119392 92/401 (23%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 100/422 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163135
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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